Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.04□□□□□ -1.44
NPIPA3F8WFD2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AP003486.1-201ENST00000525716 3994 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC079949.2-201ENST00000617117 2933 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC020658.2-201ENST00000559030 4020 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 SNORA38B-201ENST00000363524 131 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 RNA5SP232-201ENST00000364144 119 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 VN1R12P-201ENST00000403778 876 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 RN7SKP129-201ENST00000410288 299 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC096537.2-201ENST00000413707 714 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC245452.2-201ENST00000435222 392 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AL138899.2-201ENST00000439139 499 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC117395.1-201ENST00000487390 403 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 RPS27P20-201ENST00000492051 246 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 TDGP1-201ENST00000543961 1229 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC025283.1-201ENST00000572039 734 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AP005901.4-201ENST00000577336 569 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPIPA3F8WFD2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
NPIPA3F8WFD2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
NPIPA3F8WFD2 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 PSMC1P4-201ENST00000515236 1327 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 CAP1P2-201ENST00000417455 1409 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 PPIAP24-201ENST00000328558 471 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 U3.52-201ENST00000384034 216 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 CXADRP1-201ENST00000398098 1095 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC002069.1-201ENST00000429649 1159 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 COL11A2P1-205ENST00000441798 676 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC007383.1-201ENST00000445875 636 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 UBBP5-201ENST00000446970 266 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC097359.1-201ENST00000447946 463 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC106800.2-201ENST00000514009 1103 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 RNA5SP473-201ENST00000516402 125 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC004232.1-201ENST00000571388 208 ntBASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.02□□□□□ -1.45
NPIPA3F8WFD2 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms