Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RN7SKP273-201ENST00000411392 314 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC246680.2-201ENST00000422106 389 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 RPL5P6-201ENST00000425640 886 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC244035.1-201ENST00000430042 390 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 USP9YP31-201ENST00000431405 881 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 GTF2IP3-201ENST00000433887 494 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 RPS21P1-201ENST00000434479 247 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AMD1P1-201ENST00000457220 922 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC005550.2-201ENST00000476382 318 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 RN7SL338P-201ENST00000481467 293 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC022447.1-201ENST00000515358 464 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 RN7SKP34-201ENST00000516142 244 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC100823.2-201ENST00000518337 699 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC016957.1-201ENST00000534895 309 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 ZNF519P3-201ENST00000557158 1032 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 MTCYBP22-201ENST00000603788 447 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC103724.4-201ENST00000605981 292 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AL158211.4-201ENST00000606988 584 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC012511.1-201ENST00000608140 449 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC016769.4-201ENST00000616893 535 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.9□□□□□ -1.3
ATG4DQ86TL0 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 TRIM51HP-202ENST00000530412 1823 ntBASIC6.9□□□□□ -1.31
ATG4DQ86TL0 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ATG4DQ86TL0 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AL161891.1-201ENST00000621575 4636 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AC011008.2-201ENST00000624866 3352 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 RNU4-92P-201ENST00000363783 136 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 FAM204BP-201ENST00000369171 701 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 LST1-211ENST00000376110 433 ntTSL 3 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 RPL34P19-201ENST00000415903 342 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 CNOT7P2-201ENST00000441051 832 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AC007000.1-201ENST00000453064 794 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 CEACAMP11-201ENST00000455211 583 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 NMNAT1P3-201ENST00000457517 888 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AC096922.1-201ENST00000461635 651 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 AP002371.1-201ENST00000463604 433 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 CYCSP20-201ENST00000473154 315 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 RPL7AP56-201ENST00000476420 791 ntBASIC6.89□□□□□ -1.31
ATG4DQ86TL0 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.89□□□□□ -1.31
ATG4DQ86TL0 RN7SL153P-201ENST00000486501 292 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms