Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 Z97989.1-201ENST00000531702 2421 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTL4Q6ZR62 AL662795.2-201ENST00000624252 3706 ntBASIC6.2□□□□□ -1.42
RTL4Q6ZR62 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AKAP17BP-201ENST00000431706 2719 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC009779.8-201ENST00000641684 4384 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 RNA5SP321-201ENST00000362722 111 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC239367.3-201ENST00000428996 814 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC013403.1-201ENST00000436954 263 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AL031681.1-201ENST00000443304 400 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AKR1D1P1-201ENST00000457236 936 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC099340.1-201ENST00000475247 599 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 RN7SL561P-201ENST00000488553 281 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AL390198.2-201ENST00000510553 222 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 OR7A8P-201ENST00000595427 913 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AL035425.4-201ENST00000624509 1063 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 AC007603.3-201ENST00000636915 979 ntBASIC6.19□□□□□ -1.42
RTL4Q6ZR62 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.19□□□□□ -1.42
RTL4Q6ZR62 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 TTC41P-205ENST00000551270 3963 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC025809.2-201ENST00000625085 1802 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 RBPJP6-201ENST00000411556 1431 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC007159.1-201ENST00000566529 4706 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 RNA5SP308-201ENST00000362532 115 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 RNA5SP333-201ENST00000363466 118 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 RNA5SP334-201ENST00000364825 118 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 SNORA70.3-201ENST00000365075 132 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 GAPDHP19-201ENST00000431768 1005 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 RPS18P1-201ENST00000447840 458 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 PPP1R11P1-201ENST00000486095 376 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 NACAP5-201ENST00000509863 636 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 RN7SKP64-201ENST00000517206 328 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AP000662.1-201ENST00000530952 487 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC067852.5-201ENST00000589299 310 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC091133.5-201ENST00000603088 301 ntBASIC6.18□□□□□ -1.42
RTL4Q6ZR62 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
RTL4Q6ZR62 AC061999.1-201ENST00000624454 177 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms