Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AL162171.3-201ENST00000617439 3178 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 CBX1P5-201ENST00000475330 559 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 DUTP7-201ENST00000507982 486 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 GAPDHP71-201ENST00000511530 1003 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 CR383658.1-201ENST00000514609 734 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 NATP-201ENST00000523491 878 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC111186.1-201ENST00000604684 130 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 Mico1.1-201ENST00000611698 204 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AP000550.3-201ENST00000637734 379 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 TMEM75-201ENST00000624314 2165 ntBASIC6.29□□□□□ -1.4
RIF1Q5UIP0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AL354890.1-201ENST00000413730 346 ntBASIC6.29□□□□□ -1.4
RIF1Q5UIP0 RPL12P3-201ENST00000440080 396 ntBASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AL356801.1-201ENST00000559320 294 ntBASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AP005119.1-201ENST00000580956 292 ntBASIC6.29□□□□□ -1.4
RIF1Q5UIP0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 MAPK10-347ENST00000641762 2856 ntBASIC6.29□□□□□ -1.4
RIF1Q5UIP0 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AL161901.1-201ENST00000624954 3425 ntBASIC6.29□□□□□ -1.4
RIF1Q5UIP0 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIF1Q5UIP0 MIR375-201ENST00000362103 64 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 CYCSP17-201ENST00000407870 315 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 TNPO1P1-201ENST00000423641 1138 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 RPL34P33-201ENST00000486062 334 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 RN7SL466P-201ENST00000497546 295 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AL136981.1-203ENST00000451452 3844 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AL096816.1-201ENST00000623300 2920 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC092724.1-201ENST00000624623 3397 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 RNA5SP500-201ENST00000364486 119 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AL445238.1-204ENST00000400311 463 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC091390.1-201ENST00000433904 331 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 OR5D15P-201ENST00000531671 942 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC004943.1-203ENST00000624370 1074 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 MIR193BHG-214ENST00000641765 509 ntBASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIF1Q5UIP0 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms