Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC122713.2-201ENST00000624942 3335 ntBASIC7.15□□□□□ -1.26
VCPP55072 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VCPP55072 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
VCPP55072 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VCPP55072 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.15□□□□□ -1.26
VCPP55072 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VCPP55072 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.15□□□□□ -1.26
VCPP55072 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.15□□□□□ -1.26
VCPP55072 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.15□□□□□ -1.26
VCPP55072 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.15□□□□□ -1.26
VCPP55072 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.15□□□□□ -1.26
VCPP55072 AC021220.1-201ENST00000507445 630 ntBASIC7.15□□□□□ -1.26
VCPP55072 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.15□□□□□ -1.26
VCPP55072 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.15□□□□□ -1.26
VCPP55072 AC092375.1-201ENST00000550410 637 ntBASIC7.15□□□□□ -1.26
VCPP55072 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.15□□□□□ -1.26
VCPP55072 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.15□□□□□ -1.26
VCPP55072 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.15□□□□□ -1.26
VCPP55072 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.15□□□□□ -1.26
VCPP55072 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.15□□□□□ -1.26
VCPP55072 AC239803.2-201ENST00000610161 430 ntBASIC7.15□□□□□ -1.26
VCPP55072 SNX18P12-201ENST00000624821 759 ntBASIC7.15□□□□□ -1.26
VCPP55072 AL596275.2-208ENST00000641192 594 ntBASIC7.15□□□□□ -1.26
VCPP55072 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
VCPP55072 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
VCPP55072 API5P1-201ENST00000424316 1510 ntBASIC7.15□□□□□ -1.27
VCPP55072 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.15□□□□□ -1.27
VCPP55072 UGT2B27P-201ENST00000505092 1620 ntBASIC7.15□□□□□ -1.27
VCPP55072 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VCPP55072 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
VCPP55072 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VCPP55072 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
VCPP55072 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VCPP55072 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
VCPP55072 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.14□□□□□ -1.27
VCPP55072 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 OR7A2P-201ENST00000304105 930 ntBASIC7.14□□□□□ -1.27
VCPP55072 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
VCPP55072 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.14□□□□□ -1.27
VCPP55072 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 GCNT1P4-201ENST00000404096 329 ntBASIC7.14□□□□□ -1.27
VCPP55072 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 FO082842.1-201ENST00000423552 1370 ntBASIC7.14□□□□□ -1.27
VCPP55072 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.14□□□□□ -1.27
VCPP55072 BRWD1P3-201ENST00000428816 390 ntBASIC7.14□□□□□ -1.27
VCPP55072 MTCO1P11-201ENST00000429111 1528 ntBASIC7.14□□□□□ -1.27
VCPP55072 RPL12P16-201ENST00000431098 498 ntBASIC7.14□□□□□ -1.27
VCPP55072 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.14□□□□□ -1.27
VCPP55072 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 AC011352.2-201ENST00000514574 1016 ntBASIC7.14□□□□□ -1.27
VCPP55072 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.14□□□□□ -1.27
VCPP55072 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.14□□□□□ -1.27
VCPP55072 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.14□□□□□ -1.27
VCPP55072 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.14□□□□□ -1.27
VCPP55072 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 NXPE2P1-201ENST00000543705 726 ntBASIC7.14□□□□□ -1.27
VCPP55072 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.14□□□□□ -1.27
VCPP55072 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.14□□□□□ -1.27
VCPP55072 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.14□□□□□ -1.27
VCPP55072 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.14□□□□□ -1.27
VCPP55072 AL138895.2-201ENST00000603019 178 ntBASIC7.14□□□□□ -1.27
VCPP55072 AL136097.3-201ENST00000611097 505 ntBASIC7.14□□□□□ -1.27
VCPP55072 AC109309.2-201ENST00000612597 332 ntBASIC7.14□□□□□ -1.27
VCPP55072 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.14□□□□□ -1.27
VCPP55072 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VCPP55072 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.13□□□□□ -1.27
VCPP55072 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
VCPP55072 AL512329.1-201ENST00000404600 1592 ntBASIC7.13□□□□□ -1.27
VCPP55072 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.13□□□□□ -1.27
VCPP55072 AC079949.2-201ENST00000617117 2933 ntBASIC7.13□□□□□ -1.27
VCPP55072 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 LINC01613-201ENST00000561476 2780 ntBASIC7.13□□□□□ -1.27
VCPP55072 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
VCPP55072 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.13□□□□□ -1.27
VCPP55072 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 RN7SKP275-201ENST00000364626 301 ntBASIC7.13□□□□□ -1.27
VCPP55072 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VCPP55072 YWHAZP6-201ENST00000399764 738 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms