Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.44□□□□□ -1.22
HMGCS2P54868 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.44□□□□□ -1.22
HMGCS2P54868 PPIAP7-201ENST00000454070 489 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.44□□□□□ -1.22
HMGCS2P54868 KHDC1P1-201ENST00000511053 508 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 IGHV4-55-201ENST00000520889 368 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 AP000620.1-201ENST00000527147 504 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.44□□□□□ -1.22
HMGCS2P54868 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 AC092681.3-201ENST00000609463 678 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 FO681491.1-202ENST00000623392 737 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 AC104447.1-201ENST00000624214 2124 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 AL136984.1-201ENST00000607611 1893 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.44□□□□□ -1.22
HMGCS2P54868 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
HMGCS2P54868 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.44□□□□□ -1.22
HMGCS2P54868 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.44□□□□□ -1.22
HMGCS2P54868 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.44□□□□□ -1.22
HMGCS2P54868 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGCS2P54868 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGCS2P54868 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.43□□□□□ -1.22
HMGCS2P54868 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 AC018717.1-201ENST00000457712 1505 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.43□□□□□ -1.22
HMGCS2P54868 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 AC009237.3-203ENST00000442128 3551 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGCS2P54868 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
HMGCS2P54868 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
HMGCS2P54868 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGCS2P54868 RNA5SP346-201ENST00000363541 121 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AC096537.2-201ENST00000413707 714 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 MORF4L1P5-201ENST00000433352 961 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
HMGCS2P54868 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGCS2P54868 AL391987.1-201ENST00000441025 200 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AC073109.1-201ENST00000445066 978 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AL359839.1-201ENST00000451975 1160 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AL158068.1-201ENST00000506116 616 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGCS2P54868 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AC092332.1-201ENST00000563684 829 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AC025171.4-201ENST00000607250 1047 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AC007993.1-201ENST00000621298 2430 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 NEK2P4-201ENST00000425793 1329 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AL512310.3-201ENST00000547023 1335 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AC119674.1-204ENST00000641348 1343 ntBASIC7.43□□□□□ -1.22
HMGCS2P54868 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGCS2P54868 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGCS2P54868 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 RNU1-46P-201ENST00000384425 164 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 AC104843.2-201ENST00000427666 297 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 IGLV3-4-201ENST00000432300 244 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGCS2P54868 AC023141.3-201ENST00000436698 278 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 ATP5LP2-201ENST00000440646 311 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 AC098847.1-201ENST00000473094 348 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.42□□□□□ -1.22
HMGCS2P54868 RN7SL714P-201ENST00000487050 298 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 SLC25A14P1-201ENST00000502867 901 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGCS2P54868 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGCS2P54868 AC083906.1-201ENST00000509298 406 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 RNA5SP340-201ENST00000517132 107 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 NATP-201ENST00000523491 878 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGCS2P54868 AC005332.4-201ENST00000592752 579 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 AC073333.2-201ENST00000603589 769 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 AC005393.1-201ENST00000617916 584 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 OR1N1-202ENST00000619659 939 ntBASIC7.42□□□□□ -1.22
HMGCS2P54868 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms