Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.74□□□□□ -1.33
HTTP42858 AC026826.1-201ENST00000493002 361 ntBASIC6.74□□□□□ -1.33
HTTP42858 AC009120.1-201ENST00000493458 473 ntBASIC6.74□□□□□ -1.33
HTTP42858 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.74□□□□□ -1.33
HTTP42858 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.74□□□□□ -1.33
HTTP42858 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HTTP42858 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.74□□□□□ -1.33
HTTP42858 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.74□□□□□ -1.33
HTTP42858 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.74□□□□□ -1.33
HTTP42858 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.74□□□□□ -1.33
HTTP42858 RN7SKP29-201ENST00000410957 272 ntBASIC6.74□□□□□ -1.33
HTTP42858 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.74□□□□□ -1.33
HTTP42858 RN7SL870P-201ENST00000460111 296 ntBASIC6.74□□□□□ -1.33
HTTP42858 RN7SKP66-201ENST00000516681 231 ntBASIC6.74□□□□□ -1.33
HTTP42858 MIR7703-201ENST00000620784 77 ntBASIC6.74□□□□□ -1.33
HTTP42858 AC130456.6-201ENST00000623745 765 ntBASIC6.74□□□□□ -1.33
HTTP42858 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
HTTP42858 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 SIK2-201ENST00000304987 9678 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
HTTP42858 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC6.73□□□□□ -1.33
HTTP42858 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.73□□□□□ -1.33
HTTP42858 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HTTP42858 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.73□□□□□ -1.33
HTTP42858 RPL7P61-201ENST00000451721 751 ntBASIC6.73□□□□□ -1.33
HTTP42858 AC090142.2-201ENST00000483263 416 ntBASIC6.73□□□□□ -1.33
HTTP42858 AP001922.4-201ENST00000526967 290 ntBASIC6.73□□□□□ -1.33
HTTP42858 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.73□□□□□ -1.33
HTTP42858 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.73□□□□□ -1.33
HTTP42858 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HTTP42858 AC245047.1-201ENST00000433276 873 ntBASIC6.73□□□□□ -1.33
HTTP42858 AL445928.1-201ENST00000435545 222 ntBASIC6.73□□□□□ -1.33
HTTP42858 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.73□□□□□ -1.33
HTTP42858 OR2AO1P-201ENST00000476497 403 ntBASIC6.73□□□□□ -1.33
HTTP42858 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 TAS2R6P-201ENST00000605022 826 ntBASIC6.73□□□□□ -1.33
HTTP42858 AL022394.1-201ENST00000606979 292 ntBASIC6.73□□□□□ -1.33
HTTP42858 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 MFSD8-219ENST00000641228 2559 ntBASIC6.73□□□□□ -1.33
HTTP42858 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 SALL4-201ENST00000217086 5208 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HTTP42858 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.73□□□□□ -1.33
HTTP42858 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HTTP42858 AC110373.1-201ENST00000505994 3505 ntBASIC6.72□□□□□ -1.33
HTTP42858 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 RPL7L1P11-201ENST00000446092 721 ntBASIC6.72□□□□□ -1.33
HTTP42858 DNAJB5P1-201ENST00000454004 806 ntBASIC6.72□□□□□ -1.33
HTTP42858 RN7SL591P-201ENST00000496150 292 ntBASIC6.72□□□□□ -1.33
HTTP42858 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.72□□□□□ -1.33
HTTP42858 OR1F2P-201ENST00000570470 933 ntBASIC6.72□□□□□ -1.33
HTTP42858 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
HTTP42858 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HTTP42858 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HTTP42858 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HTTP42858 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.72□□□□□ -1.33
HTTP42858 AC092905.1-201ENST00000467527 949 ntBASIC6.72□□□□□ -1.33
HTTP42858 AC105233.1-201ENST00000498840 781 ntBASIC6.72□□□□□ -1.33
HTTP42858 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms