Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.85□□□□□ -1.15
CNGA1P29973 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.85□□□□□ -1.15
CNGA1P29973 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 RNU6-1017P-201ENST00000363613 106 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.85□□□□□ -1.15
CNGA1P29973 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.85□□□□□ -1.15
CNGA1P29973 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.85□□□□□ -1.15
CNGA1P29973 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.85□□□□□ -1.15
CNGA1P29973 GAPDHP37-201ENST00000442317 968 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.85□□□□□ -1.15
CNGA1P29973 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.85□□□□□ -1.15
CNGA1P29973 AC093166.3-201ENST00000448785 303 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 OR52I1-201ENST00000450052 1050 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 AC018638.3-201ENST00000461273 132 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.85□□□□□ -1.15
CNGA1P29973 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.85□□□□□ -1.15
CNGA1P29973 OR4A1P-201ENST00000532342 920 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 SETP17-201ENST00000534163 817 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 TOMM20P1-201ENST00000534518 427 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 AC007537.1-201ENST00000539347 327 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.85□□□□□ -1.15
CNGA1P29973 AC125612.1-201ENST00000547580 377 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.85□□□□□ -1.15
CNGA1P29973 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.85□□□□□ -1.15
CNGA1P29973 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.85□□□□□ -1.15
CNGA1P29973 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.85□□□□□ -1.15
CNGA1P29973 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.85□□□□□ -1.15
CNGA1P29973 OR4H6P-202ENST00000603819 340 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 AL158211.2-201ENST00000607282 395 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.85□□□□□ -1.15
CNGA1P29973 CASC19-232ENST00000641480 1244 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 CASC19-274ENST00000642018 970 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.85□□□□□ -1.15
CNGA1P29973 AL137918.1-201ENST00000624542 1922 ntBASIC7.85□□□□□ -1.15
CNGA1P29973 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.85□□□□□ -1.15
CNGA1P29973 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNGA1P29973 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CNGA1P29973 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 SPATA31C1-201ENST00000420021 3895 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 AL358913.2-201ENST00000553881 1548 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
CNGA1P29973 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 AL353625.1-202ENST00000366273 571 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 AL391419.1-201ENST00000398901 1275 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 OR7E156P-201ENST00000400303 464 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.84□□□□□ -1.15
CNGA1P29973 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.84□□□□□ -1.15
CNGA1P29973 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.84□□□□□ -1.15
CNGA1P29973 OR6R1P-201ENST00000431838 940 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.84□□□□□ -1.15
CNGA1P29973 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.84□□□□□ -1.15
CNGA1P29973 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 AC144530.1-201ENST00000452862 555 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 RN7SL216P-201ENST00000471607 298 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 AC005017.1-201ENST00000482002 490 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.84□□□□□ -1.15
CNGA1P29973 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.84□□□□□ -1.15
CNGA1P29973 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.84□□□□□ -1.15
CNGA1P29973 RNA5SP318-201ENST00000516352 92 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.84□□□□□ -1.15
CNGA1P29973 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.84□□□□□ -1.15
CNGA1P29973 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.84□□□□□ -1.15
CNGA1P29973 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.84□□□□□ -1.15
CNGA1P29973 AL049840.6-201ENST00000604583 345 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 AP000240.1-201ENST00000609910 452 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CNGA1P29973 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.84□□□□□ -1.15
CNGA1P29973 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.84□□□□□ -1.15
CNGA1P29973 TMEM75-201ENST00000624314 2165 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.84□□□□□ -1.15
CNGA1P29973 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.84□□□□□ -1.15
CNGA1P29973 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.84□□□□□ -1.15
CNGA1P29973 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms