Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 AP001646.2-201ENST00000528645 1156 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 AP006587.5-201ENST00000532033 739 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.18□□□□□ -1.1
HMGB1P09429 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.18□□□□□ -1.1
HMGB1P09429 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.18□□□□□ -1.1
HMGB1P09429 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.18□□□□□ -1.1
HMGB1P09429 MRPL45P2-203ENST00000573318 473 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.18□□□□□ -1.1
HMGB1P09429 AC011447.2-201ENST00000592921 283 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 KATNBL1P1-201ENST00000605192 748 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 AC005021.1-201ENST00000608730 355 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 AC074276.2-201ENST00000619891 348 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 AC021106.3-201ENST00000623925 531 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 MIR665-201ENST00000635949 72 ntBASIC8.18□□□□□ -1.1
HMGB1P09429 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.18□□□□□ -1.1
HMGB1P09429 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HMGB1P09429 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC8.18□□□□□ -1.1
HMGB1P09429 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HMGB1P09429 AC097063.1-201ENST00000426714 1797 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.17□□□□□ -1.1
HMGB1P09429 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC8.17□□□□□ -1.1
HMGB1P09429 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HMGB1P09429 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 RN7SKP30-201ENST00000411373 334 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 RPSAP60-201ENST00000415403 880 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AL359633.1-201ENST00000421403 310 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HMGB1P09429 AC009362.1-201ENST00000427253 406 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.17□□□□□ -1.1
HMGB1P09429 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.17□□□□□ -1.1
HMGB1P09429 Z99127.2-201ENST00000441426 334 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.17□□□□□ -1.1
HMGB1P09429 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC8.17□□□□□ -1.1
HMGB1P09429 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.17□□□□□ -1.1
HMGB1P09429 AC079193.1-201ENST00000460497 588 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC8.17□□□□□ -1.1
HMGB1P09429 AC026254.2-201ENST00000475295 371 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AC037198.2-201ENST00000478845 733 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.17□□□□□ -1.1
HMGB1P09429 AC021087.2-201ENST00000504656 1203 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC8.17□□□□□ -1.1
HMGB1P09429 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.17□□□□□ -1.1
HMGB1P09429 HNRNPCP8-201ENST00000528764 888 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 SSU72P6-201ENST00000532644 488 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.17□□□□□ -1.1
HMGB1P09429 AC012414.2-201ENST00000559474 187 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.17□□□□□ -1.1
HMGB1P09429 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.17□□□□□ -1.1
HMGB1P09429 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.17□□□□□ -1.1
HMGB1P09429 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC8.17□□□□□ -1.1
HMGB1P09429 MIR6736-201ENST00000616799 59 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 AC120057.5-201ENST00000623840 154 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.17□□□□□ -1.1
HMGB1P09429 AL354702.2-202ENST00000641481 890 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.17□□□□□ -1.1
HMGB1P09429 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 AP005139.1-201ENST00000580702 1647 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 AC020658.2-201ENST00000559030 4020 ntBASIC8.17□□□□□ -1.1
HMGB1P09429 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.17□□□□□ -1.1
HMGB1P09429 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HMGB1P09429 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.17□□□□□ -1.1
HMGB1P09429 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HMGB1P09429 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HMGB1P09429 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC8.16□□□□□ -1.1
HMGB1P09429 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.16□□□□□ -1.1
HMGB1P09429 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC8.16□□□□□ -1.1
HMGB1P09429 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
HMGB1P09429 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMGB1P09429 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMGB1P09429 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HMGB1P09429 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
HMGB1P09429 ATP5BP1-201ENST00000411980 1574 ntBASIC8.16□□□□□ -1.1
HMGB1P09429 AL662791.3-201ENST00000413771 776 ntBASIC8.16□□□□□ -1.1
HMGB1P09429 AC113412.1-201ENST00000425840 504 ntBASIC8.16□□□□□ -1.1
HMGB1P09429 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC8.16□□□□□ -1.1
HMGB1P09429 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC8.16□□□□□ -1.1
HMGB1P09429 GOT2P2-201ENST00000450663 1251 ntBASIC8.16□□□□□ -1.1
HMGB1P09429 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.16□□□□□ -1.1
HMGB1P09429 HGF-207ENST00000453018 721 ntTSL 3 BASIC8.16□□□□□ -1.1
HMGB1P09429 NMNAT1P3-201ENST00000457517 888 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms