Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC024940.4-201ENST00000605507 246 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 SNORA74.4-201ENST00000607595 199 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 AC004477.3-201ENST00000614061 590 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 AC005277.2-201ENST00000617898 390 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.98□□□□□ -1.45
SPTA1P02549 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 AC027575.3-201ENST00000583058 2747 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 AC026254.2-201ENST00000475295 371 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 AC021220.1-201ENST00000507445 630 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SPTA1P02549 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 SPTLC1P2-201ENST00000407089 121 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 OR3A2-201ENST00000408891 1076 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 RANP6-201ENST00000413691 644 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 AC055733.3-201ENST00000505214 523 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 RNA5SP206-201ENST00000516703 121 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.97□□□□□ -1.45
SPTA1P02549 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 AL162632.2-201ENST00000553933 399 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 AC004908.1-201ENST00000606572 541 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 MAPK10-379ENST00000642013 1385 ntBASIC5.97□□□□□ -1.45
SPTA1P02549 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SPTA1P02549 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC5.97□□□□□ -1.45
SPTA1P02549 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC5.97□□□□□ -1.45
SPTA1P02549 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
SPTA1P02549 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
SPTA1P02549 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SPTA1P02549 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SPTA1P02549 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.96□□□□□ -1.45
SPTA1P02549 AC110998.1-201ENST00000519029 2053 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SPTA1P02549 DDX43P1-201ENST00000510713 1763 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SPTA1P02549 AC096992.2-201ENST00000609553 1684 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.45
SPTA1P02549 RBMY2KP-201ENST00000418221 992 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 AL355433.1-201ENST00000422804 300 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC5.96□□□□□ -1.45
SPTA1P02549 AC091685.2-201ENST00000454924 864 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.96□□□□□ -1.45
SPTA1P02549 AL672167.3-201ENST00000465951 960 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 RPS10P20-201ENST00000494130 463 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 RN7SL187P-201ENST00000495587 303 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 RPL10P18-201ENST00000519384 309 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 AP005597.2-201ENST00000526238 341 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.96□□□□□ -1.45
SPTA1P02549 CR383656.6-201ENST00000550518 394 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.96□□□□□ -1.45
SPTA1P02549 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.96□□□□□ -1.45
SPTA1P02549 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.96□□□□□ -1.45
SPTA1P02549 ELOCP28-201ENST00000590044 317 ntBASIC5.96□□□□□ -1.45
SPTA1P02549 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.96□□□□□ -1.45
SPTA1P02549 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.96□□□□□ -1.45
SPTA1P02549 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SPTA1P02549 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SPTA1P02549 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SPTA1P02549 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SPTA1P02549 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
SPTA1P02549 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SPTA1P02549 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SPTA1P02549 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms