Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP003108.4-201ENST00000623917 878 ntBASIC6.15□□□□□ -1.42
SCN2BO60939 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.15□□□□□ -1.42
SCN2BO60939 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.15□□□□□ -1.42
SCN2BO60939 AC126474.2-201ENST00000623268 1750 ntBASIC6.15□□□□□ -1.43
SCN2BO60939 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCN2BO60939 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.15□□□□□ -1.43
SCN2BO60939 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
SCN2BO60939 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.15□□□□□ -1.43
SCN2BO60939 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
SCN2BO60939 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCN2BO60939 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 AC023245.2-201ENST00000530760 2978 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.14□□□□□ -1.43
SCN2BO60939 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SCN2BO60939 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 RNA5SP350-201ENST00000363298 111 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 RN7SKP191-201ENST00000364713 306 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SCN2BO60939 AL451061.1-201ENST00000407887 862 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 RNA5SP251-201ENST00000410614 137 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 RN7SKP161-201ENST00000411110 305 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC092646.1-201ENST00000427142 901 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN2BO60939 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN2BO60939 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC073648.3-201ENST00000504939 925 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC137549.1-201ENST00000514243 533 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.14□□□□□ -1.43
SCN2BO60939 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC093635.1-201ENST00000609028 555 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 AC024255.1-201ENST00000614376 102 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 AC007671.1-201ENST00000616957 830 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 MRPL57P1-201ENST00000621486 265 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN2BO60939 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
SCN2BO60939 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.14□□□□□ -1.43
SCN2BO60939 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN2BO60939 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN2BO60939 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SCN2BO60939 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SCN2BO60939 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 OFD1P17-201ENST00000437639 3018 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN2BO60939 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 AC068769.1-201ENST00000474767 2426 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SCN2BO60939 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SCN2BO60939 PPIAP24-201ENST00000328558 471 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 RNA5SP382-201ENST00000363355 112 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 SNORD8-201ENST00000363915 110 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
SCN2BO60939 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.13□□□□□ -1.43
SCN2BO60939 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 U3.43-201ENST00000410734 213 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 UBBP5-201ENST00000446970 266 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 RBMY2EP-202ENST00000456360 940 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 SNX18P26-201ENST00000458433 740 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN2BO60939 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.13□□□□□ -1.43
SCN2BO60939 AC091965.3-201ENST00000506236 208 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.13□□□□□ -1.43
SCN2BO60939 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN2BO60939 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.13□□□□□ -1.43
SCN2BO60939 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN2BO60939 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN2BO60939 AC026956.1-201ENST00000558741 396 ntBASIC6.13□□□□□ -1.43
SCN2BO60939 MIR378H-201ENST00000579966 83 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms