Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC073916.1-201ENST00000545095 130 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC012065.3-201ENST00000602736 439 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 MIR6774-201ENST00000614651 70 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 MAPK10-270ENST00000641102 3538 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC067942.1-201ENST00000488045 1493 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC092634.1-201ENST00000366505 199 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AL353133.1-201ENST00000407695 401 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 SPATA20P1-201ENST00000423089 438 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 HMGN1P32-201ENST00000441744 256 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC236972.4-201ENST00000458091 963 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 RPS3AP49-201ENST00000472161 790 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 RN7SL790P-201ENST00000474043 298 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 RN7SL37P-201ENST00000490461 307 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 RN7SKP196-201ENST00000516267 345 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC091133.5-201ENST00000603088 301 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AL035425.4-201ENST00000624509 1063 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 AC087269.2-201ENST00000641764 975 ntBASIC6.74□□□□□ -1.33
PCDH9Q9HC56 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDH9Q9HC56 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC010132.4-201ENST00000569883 1368 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 FDPSP5-201ENST00000399474 1057 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 RN7SKP205-201ENST00000410999 307 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 RNA5SP115-201ENST00000411160 107 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AL359092.1-201ENST00000417156 265 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AP003385.1-201ENST00000426387 893 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC063955.1-201ENST00000462872 685 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC099340.1-201ENST00000475247 599 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 RN7SL165P-201ENST00000477476 291 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC009567.2-201ENST00000502989 349 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 MINOS1P4-201ENST00000515470 318 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC131935.1-201ENST00000524621 333 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 CHEK2P2-201ENST00000554701 672 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC022001.1-201ENST00000605193 268 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 U91328.4-201ENST00000608919 517 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms