Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 RNU1-49P-201ENST00000363468 159 ntBASIC9.9□□□□□ -0.82
VPS8Q8N3P4 AL445238.1-204ENST00000400311 463 ntBASIC9.9□□□□□ -0.82
VPS8Q8N3P4 AL354707.3-201ENST00000427308 331 ntBASIC9.9□□□□□ -0.82
VPS8Q8N3P4 GAPDHP34-201ENST00000432112 823 ntBASIC9.9□□□□□ -0.82
VPS8Q8N3P4 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 OR3D1P-201ENST00000438288 955 ntBASIC9.9□□□□□ -0.82
VPS8Q8N3P4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 AC073389.3-201ENST00000609434 935 ntBASIC9.9□□□□□ -0.82
VPS8Q8N3P4 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
VPS8Q8N3P4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 CXADRP1-201ENST00000398098 1095 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 SMARCE1P6-201ENST00000398372 1216 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 GCNT1P4-201ENST00000404096 329 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 UBE2V1P14-201ENST00000415815 558 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 OR52I1-201ENST00000450052 1050 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 RPS27AP3-201ENST00000453803 454 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 RPL12P30-201ENST00000488389 499 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 RNA5SP434-201ENST00000516647 121 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 RN7SKP70-201ENST00000516655 271 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 RN7SKP35-201ENST00000517210 151 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 NPIPB14P-203ENST00000532298 987 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AP001823.1-201ENST00000604056 1003 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 CXADRP3-202ENST00000617265 1100 ntBASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
VPS8Q8N3P4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 EEF1A1P9-201ENST00000514975 1383 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AC098614.1-202ENST00000634895 1830 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 RNA5SP333-201ENST00000363466 118 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 RNA5SP334-201ENST00000364825 118 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AL645936.1-201ENST00000441979 518 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AC016908.1-201ENST00000442571 1219 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 RANP2-201ENST00000456833 229 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 MAST4-IT1-201ENST00000514241 658 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 FAU-203ENST00000525297 355 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AP005639.1-201ENST00000526939 192 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AC097641.3-201ENST00000613523 464 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 AC011504.1-201ENST00000623331 4103 ntBASIC9.89□□□□□ -0.83
VPS8Q8N3P4 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS8Q8N3P4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 OR2AH1P-202ENST00000641232 2744 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms