Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 SMG1P5-202ENST00000529428 4219 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 SMG1P2-201ENST00000566127 4221 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AC062029.1-202ENST00000606164 3651 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 SAGE3P-201ENST00000619800 1635 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AL391419.1-201ENST00000398901 1275 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 RPL7AP51-201ENST00000422016 760 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 MIR4301-201ENST00000577203 66 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AC063977.7-201ENST00000594454 337 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AL589765.6-201ENST00000601909 549 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AL078623.1-201ENST00000602702 907 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 MIR6085-201ENST00000618314 110 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AL121936.2-201ENST00000641935 662 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 AC010624.4-201ENST00000597606 1351 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 BRD7P1-201ENST00000557705 1915 ntBASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
C9orf40Q8IXQ3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 RNA5SP188-201ENST00000362916 129 ntBASIC6□□□□□ -1.45
C9orf40Q8IXQ3 SNORD35A-201ENST00000363389 86 ntBASIC6□□□□□ -1.45
C9orf40Q8IXQ3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 MED28P4-201ENST00000433137 572 ntBASIC6□□□□□ -1.45
C9orf40Q8IXQ3 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 RN7SL39P-201ENST00000462264 297 ntBASIC6□□□□□ -1.45
C9orf40Q8IXQ3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 AC022206.1-201ENST00000495947 347 ntBASIC6□□□□□ -1.45
C9orf40Q8IXQ3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 GUSBP9-201ENST00000510138 584 ntBASIC6□□□□□ -1.45
C9orf40Q8IXQ3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 AC135983.3-201ENST00000528049 1226 ntBASIC6□□□□□ -1.45
C9orf40Q8IXQ3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6□□□□□ -1.45
C9orf40Q8IXQ3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.99□□□□□ -1.45
C9orf40Q8IXQ3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms