Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CDY5P-201ENST00000411487 1580 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CDY9P-201ENST00000451397 1580 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL049634.1-201ENST00000453770 1720 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL079341.1-201ENST00000404701 1207 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC000089.1-201ENST00000424559 801 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL451136.1-201ENST00000435399 325 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL592114.2-201ENST00000440142 532 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 RPS10P28-201ENST00000480396 498 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL390198.2-201ENST00000510553 222 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL162632.2-201ENST00000553933 399 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL445383.1-201ENST00000554689 874 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC091304.5-201ENST00000568969 158 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CCL2-202ENST00000580907 736 ntTSL 2 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 OR7A11P-201ENST00000597719 953 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AL078623.1-201ENST00000602702 907 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC012511.1-201ENST00000608140 449 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 MIR7854-201ENST00000620068 65 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCNQ0VAF6 AC092701.1-201ENST00000623627 1551 ntBASIC4.36□□□□□ -1.71
SYCNQ0VAF6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 RN7SKP130-201ENST00000364924 301 ntBASIC4.35□□□□□ -1.71
SYCNQ0VAF6 RNA5SP442-201ENST00000365050 107 ntBASIC4.35□□□□□ -1.71
SYCNQ0VAF6 RNA5SP35-201ENST00000391257 129 ntBASIC4.35□□□□□ -1.71
SYCNQ0VAF6 LDHAP5-201ENST00000394996 622 ntBASIC4.35□□□□□ -1.71
SYCNQ0VAF6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.35□□□□□ -1.71
SYCNQ0VAF6 EEF1GP6-201ENST00000402309 905 ntBASIC4.35□□□□□ -1.71
SYCNQ0VAF6 OR2W4P-201ENST00000406496 926 ntBASIC4.35□□□□□ -1.71
SYCNQ0VAF6 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms