Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
BRCA2P51587 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BRCA2P51587 RPS7P8-201ENST00000418311 581 ntBASIC6.73□□□□□ -1.33
BRCA2P51587 CDK7P1-201ENST00000434574 693 ntBASIC6.73□□□□□ -1.33
BRCA2P51587 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.73□□□□□ -1.33
BRCA2P51587 OR2AO1P-201ENST00000476497 403 ntBASIC6.73□□□□□ -1.33
BRCA2P51587 MIR7703-201ENST00000620784 77 ntBASIC6.73□□□□□ -1.33
BRCA2P51587 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC6.73□□□□□ -1.33
BRCA2P51587 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BRCA2P51587 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
BRCA2P51587 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.73□□□□□ -1.33
BRCA2P51587 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BRCA2P51587 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
BRCA2P51587 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 OR6E1P-201ENST00000414424 923 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.72□□□□□ -1.33
BRCA2P51587 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.72□□□□□ -1.33
BRCA2P51587 AC093267.1-201ENST00000489176 961 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 NENFP3-201ENST00000503735 313 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 AL355377.1-201ENST00000621125 1653 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 RNA5SP350-201ENST00000363298 111 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 AL096829.1-201ENST00000413677 457 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.72□□□□□ -1.33
BRCA2P51587 AL450023.1-201ENST00000450868 751 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 IGKV1D-22-201ENST00000518953 324 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AL049779.2-201ENST00000553847 315 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AC079075.1-201ENST00000559543 878 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 TAS2R6P-201ENST00000605022 826 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AC007683.2-201ENST00000624681 714 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.72□□□□□ -1.33
BRCA2P51587 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 RPL36P18-201ENST00000419316 318 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.72□□□□□ -1.33
BRCA2P51587 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.72□□□□□ -1.33
BRCA2P51587 HNRNPCP1-201ENST00000556181 766 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 AC009120.3-201ENST00000563335 499 ntBASIC6.72□□□□□ -1.33
BRCA2P51587 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
BRCA2P51587 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
BRCA2P51587 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCA2P51587 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.71□□□□□ -1.33
BRCA2P51587 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
BRCA2P51587 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
BRCA2P51587 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
BRCA2P51587 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
BRCA2P51587 C1orf116-201ENST00000359470 5493 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
BRCA2P51587 AC005033.1-201ENST00000428904 813 ntBASIC6.71□□□□□ -1.33
BRCA2P51587 AL445928.1-201ENST00000435545 222 ntBASIC6.71□□□□□ -1.33
BRCA2P51587 RPS7P3-201ENST00000443360 580 ntBASIC6.71□□□□□ -1.33
BRCA2P51587 EIF1P7-201ENST00000487533 337 ntBASIC6.71□□□□□ -1.33
BRCA2P51587 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.71□□□□□ -1.33
BRCA2P51587 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.71□□□□□ -1.33
BRCA2P51587 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC6.71□□□□□ -1.33
BRCA2P51587 SUGT1P3-202ENST00000604259 383 ntBASIC6.71□□□□□ -1.33
BRCA2P51587 MIR7159-201ENST00000620587 66 ntBASIC6.71□□□□□ -1.33
BRCA2P51587 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
BRCA2P51587 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
BRCA2P51587 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
BRCA2P51587 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
BRCA2P51587 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.71□□□□□ -1.34
BRCA2P51587 AC099521.1-201ENST00000482557 334 ntBASIC6.71□□□□□ -1.34
BRCA2P51587 AC106800.3-201ENST00000511389 308 ntBASIC6.71□□□□□ -1.34
BRCA2P51587 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.71□□□□□ -1.34
BRCA2P51587 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.71□□□□□ -1.34
BRCA2P51587 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms