Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.05□□□□□ -1.28
SSR1P43307 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
SSR1P43307 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 RNA5SP429-201ENST00000363688 109 ntBASIC7.05□□□□□ -1.28
SSR1P43307 RN7SKP189-201ENST00000365042 330 ntBASIC7.05□□□□□ -1.28
SSR1P43307 MIR187-201ENST00000385062 109 ntBASIC7.05□□□□□ -1.28
SSR1P43307 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 AL136100.1-201ENST00000407696 330 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AL713922.1-201ENST00000416477 747 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.05□□□□□ -1.28
SSR1P43307 PUDPP2-201ENST00000431423 643 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.05□□□□□ -1.28
SSR1P43307 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.05□□□□□ -1.28
SSR1P43307 RN7SL849P-201ENST00000485236 295 ntBASIC7.05□□□□□ -1.28
SSR1P43307 RPL21P42-201ENST00000488408 464 ntBASIC7.05□□□□□ -1.28
SSR1P43307 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.05□□□□□ -1.28
SSR1P43307 AP000662.1-201ENST00000530952 487 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.05□□□□□ -1.28
SSR1P43307 AC006120.1-201ENST00000579375 546 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.05□□□□□ -1.28
SSR1P43307 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 MIR6736-201ENST00000616799 59 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AC103564.3-201ENST00000621194 220 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.05□□□□□ -1.28
SSR1P43307 AC025809.2-201ENST00000625085 1802 ntBASIC7.05□□□□□ -1.28
SSR1P43307 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 AC007012.2-201ENST00000623206 1676 ntBASIC7.05□□□□□ -1.28
SSR1P43307 AC079753.1-201ENST00000623243 3868 ntBASIC7.05□□□□□ -1.28
SSR1P43307 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.05□□□□□ -1.28
SSR1P43307 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 ZNF806-201ENST00000438300 1774 ntBASIC7.05□□□□□ -1.28
SSR1P43307 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSR1P43307 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.05□□□□□ -1.28
SSR1P43307 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.04□□□□□ -1.28
SSR1P43307 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 AC013488.1-201ENST00000526618 1838 ntBASIC7.04□□□□□ -1.28
SSR1P43307 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SSR1P43307 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SSR1P43307 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SSR1P43307 PEX12P1-201ENST00000400284 1048 ntBASIC7.04□□□□□ -1.28
SSR1P43307 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 AL049697.3-201ENST00000406493 982 ntBASIC7.04□□□□□ -1.28
SSR1P43307 FDPSP6-201ENST00000425091 512 ntBASIC7.04□□□□□ -1.28
SSR1P43307 RPL34P27-201ENST00000428810 349 ntBASIC7.04□□□□□ -1.28
SSR1P43307 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.04□□□□□ -1.28
SSR1P43307 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.04□□□□□ -1.28
SSR1P43307 PFN1P11-201ENST00000445829 389 ntBASIC7.04□□□□□ -1.28
SSR1P43307 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.04□□□□□ -1.28
SSR1P43307 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.04□□□□□ -1.28
SSR1P43307 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.04□□□□□ -1.28
SSR1P43307 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 PHBP2-201ENST00000532859 806 ntBASIC7.04□□□□□ -1.28
SSR1P43307 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 AC067852.5-201ENST00000589299 310 ntBASIC7.04□□□□□ -1.28
SSR1P43307 AC011921.2-201ENST00000589465 152 ntBASIC7.04□□□□□ -1.28
SSR1P43307 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.04□□□□□ -1.28
SSR1P43307 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.04□□□□□ -1.28
SSR1P43307 AL590032.1-201ENST00000604920 252 ntBASIC7.04□□□□□ -1.28
SSR1P43307 AC009283.1-201ENST00000615852 645 ntBASIC7.04□□□□□ -1.28
SSR1P43307 MRPL57P3-201ENST00000619218 176 ntBASIC7.04□□□□□ -1.28
SSR1P43307 AP000577.1-201ENST00000624366 878 ntBASIC7.04□□□□□ -1.28
SSR1P43307 AC005858.3-201ENST00000624756 589 ntBASIC7.04□□□□□ -1.28
SSR1P43307 AC243725.1-201ENST00000637164 436 ntBASIC7.04□□□□□ -1.28
SSR1P43307 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.04□□□□□ -1.28
SSR1P43307 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.04□□□□□ -1.28
SSR1P43307 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSR1P43307 PROS2P-201ENST00000474651 1951 ntBASIC7.04□□□□□ -1.28
SSR1P43307 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
SSR1P43307 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
SSR1P43307 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SSR1P43307 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SSR1P43307 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSR1P43307 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.03□□□□□ -1.28
SSR1P43307 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC7.03□□□□□ -1.28
SSR1P43307 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.03□□□□□ -1.28
SSR1P43307 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms