Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC110760.3-201ENST00000598794 467 ntBASIC8.91□□□□□ -0.98
RXRBP28702 AC004805.3-201ENST00000603178 310 ntBASIC8.91□□□□□ -0.98
RXRBP28702 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 AC022306.2-201ENST00000617563 647 ntBASIC8.91□□□□□ -0.98
RXRBP28702 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.91□□□□□ -0.98
RXRBP28702 AC138627.1-204ENST00000641894 765 ntBASIC8.91□□□□□ -0.98
RXRBP28702 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.91□□□□□ -0.98
RXRBP28702 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 AC083806.2-201ENST00000617795 2685 ntBASIC8.91□□□□□ -0.98
RXRBP28702 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
RXRBP28702 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
RXRBP28702 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.91□□□□□ -0.98
RXRBP28702 AC005614.1-201ENST00000598952 3653 ntBASIC8.91□□□□□ -0.98
RXRBP28702 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RXRBP28702 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.9□□□□□ -0.98
RXRBP28702 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
RXRBP28702 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.9□□□□□ -0.98
RXRBP28702 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.9□□□□□ -0.98
RXRBP28702 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.9□□□□□ -0.98
RXRBP28702 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC8.9□□□□□ -0.98
RXRBP28702 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC8.9□□□□□ -0.98
RXRBP28702 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.9□□□□□ -0.98
RXRBP28702 AC114878.1-201ENST00000441166 358 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AL645936.1-201ENST00000441979 518 ntBASIC8.9□□□□□ -0.98
RXRBP28702 RPL21P133-201ENST00000443666 476 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 AC117522.2-201ENST00000510049 657 ntBASIC8.9□□□□□ -0.98
RXRBP28702 RNA5SP418-201ENST00000515951 117 ntBASIC8.9□□□□□ -0.98
RXRBP28702 RNA5SP340-201ENST00000517132 107 ntBASIC8.9□□□□□ -0.98
RXRBP28702 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC8.9□□□□□ -0.98
RXRBP28702 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC8.9□□□□□ -0.98
RXRBP28702 AC008055.1-201ENST00000547032 609 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 AC068790.2-201ENST00000602601 557 ntBASIC8.9□□□□□ -0.98
RXRBP28702 SUMO2P15-201ENST00000604285 278 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AL035410.2-201ENST00000604963 864 ntBASIC8.9□□□□□ -0.98
RXRBP28702 Z99289.3-201ENST00000605586 594 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 AC116651.1-201ENST00000609724 556 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AC096586.1-201ENST00000610267 561 ntBASIC8.9□□□□□ -0.98
RXRBP28702 CR589904.2-201ENST00000612533 440 ntBASIC8.9□□□□□ -0.98
RXRBP28702 RNA5SP440-201ENST00000612665 119 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AL080312.2-201ENST00000613001 630 ntBASIC8.9□□□□□ -0.98
RXRBP28702 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 FAM27E2-201ENST00000619668 403 ntBASIC8.9□□□□□ -0.98
RXRBP28702 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
RXRBP28702 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 XRCC6P5-201ENST00000435236 1795 ntBASIC8.9□□□□□ -0.98
RXRBP28702 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.9□□□□□ -0.98
RXRBP28702 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.9□□□□□ -0.98
RXRBP28702 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 HSPD1P4-201ENST00000547203 1702 ntBASIC8.9□□□□□ -0.98
RXRBP28702 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RXRBP28702 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RXRBP28702 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RXRBP28702 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
RXRBP28702 LINC00294-201ENST00000631190 3306 ntBASIC8.9□□□□□ -0.99
RXRBP28702 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RXRBP28702 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RXRBP28702 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.9□□□□□ -0.99
RXRBP28702 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 AC027575.3-201ENST00000583058 2747 ntBASIC8.89□□□□□ -0.99
RXRBP28702 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.89□□□□□ -0.99
RXRBP28702 AC005261.6-201ENST00000623072 1387 ntBASIC8.89□□□□□ -0.99
RXRBP28702 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.89□□□□□ -0.99
RXRBP28702 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 AL133320.1-201ENST00000621423 2352 ntBASIC8.89□□□□□ -0.99
RXRBP28702 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 RNA5SP477-201ENST00000362639 119 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms