Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL442067.2-201ENST00000614033 363 ntBASIC8.3□□□□□ -1.08
VARSP26640 AC091834.1-201ENST00000614543 472 ntBASIC8.3□□□□□ -1.08
VARSP26640 GPC6-202ENST00000617456 792 ntTSL 3 BASIC8.3□□□□□ -1.08
VARSP26640 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 AC119619.1-201ENST00000619728 112 ntBASIC8.3□□□□□ -1.08
VARSP26640 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC8.3□□□□□ -1.08
VARSP26640 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.3□□□□□ -1.08
VARSP26640 AL079343.1-201ENST00000572358 1771 ntBASIC8.3□□□□□ -1.08
VARSP26640 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VARSP26640 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
VARSP26640 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
VARSP26640 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
VARSP26640 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 RN7SKP133-201ENST00000364845 340 ntBASIC8.29□□□□□ -1.08
VARSP26640 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 RNU6-1227P-201ENST00000383981 107 ntBASIC8.29□□□□□ -1.08
VARSP26640 Y_RNA.548-201ENST00000384656 105 ntBASIC8.29□□□□□ -1.08
VARSP26640 TRBV7-5-201ENST00000390382 345 ntBASIC8.29□□□□□ -1.08
VARSP26640 VN2R17P-201ENST00000391712 832 ntBASIC8.29□□□□□ -1.08
VARSP26640 RAB5CP1-201ENST00000395972 580 ntBASIC8.29□□□□□ -1.08
VARSP26640 CAPNS1P1-201ENST00000401029 633 ntBASIC8.29□□□□□ -1.08
VARSP26640 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
VARSP26640 METTL5-204ENST00000409340 472 ntTSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 RN7SKP169-201ENST00000411124 291 ntBASIC8.29□□□□□ -1.08
VARSP26640 AL136380.2-201ENST00000411837 492 ntBASIC8.29□□□□□ -1.08
VARSP26640 AL513302.1-201ENST00000415679 428 ntBASIC8.29□□□□□ -1.08
VARSP26640 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 RPL21P111-201ENST00000418453 477 ntBASIC8.29□□□□□ -1.08
VARSP26640 MTND2P23-201ENST00000422990 651 ntBASIC8.29□□□□□ -1.08
VARSP26640 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 AC092066.1-201ENST00000425131 317 ntBASIC8.29□□□□□ -1.08
VARSP26640 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.29□□□□□ -1.08
VARSP26640 OSTCP2-201ENST00000437956 444 ntBASIC8.29□□□□□ -1.08
VARSP26640 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 OR6K1P-201ENST00000456766 971 ntBASIC8.29□□□□□ -1.08
VARSP26640 AC018638.4-201ENST00000465971 1150 ntBASIC8.29□□□□□ -1.08
VARSP26640 UBTFL6-201ENST00000477929 1024 ntBASIC8.29□□□□□ -1.08
VARSP26640 RN7SL630P-201ENST00000483714 297 ntBASIC8.29□□□□□ -1.08
VARSP26640 HMGN1P12-201ENST00000499125 195 ntBASIC8.29□□□□□ -1.08
VARSP26640 AC105252.1-201ENST00000503089 286 ntBASIC8.29□□□□□ -1.08
VARSP26640 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.29□□□□□ -1.08
VARSP26640 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC8.29□□□□□ -1.08
VARSP26640 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 AL157394.1-201ENST00000562983 1224 ntBASIC8.29□□□□□ -1.08
VARSP26640 TP53TG3HP-201ENST00000563487 346 ntBASIC8.29□□□□□ -1.08
VARSP26640 AC093249.5-201ENST00000568120 430 ntBASIC8.29□□□□□ -1.08
VARSP26640 AC012146.2-201ENST00000576545 416 ntBASIC8.29□□□□□ -1.08
VARSP26640 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.29□□□□□ -1.08
VARSP26640 AC005261.5-201ENST00000596280 355 ntBASIC8.29□□□□□ -1.08
VARSP26640 AL161729.3-201ENST00000603533 673 ntBASIC8.29□□□□□ -1.08
VARSP26640 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 AC138649.3-201ENST00000622154 254 ntBASIC8.29□□□□□ -1.08
VARSP26640 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC8.29□□□□□ -1.08
VARSP26640 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 AL391666.1-201ENST00000442570 2764 ntBASIC8.29□□□□□ -1.08
VARSP26640 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
VARSP26640 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARSP26640 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
VARSP26640 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms