Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR7A11P-201ENST00000597719 953 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 AL078623.1-201ENST00000602702 907 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 BUB1P1-201ENST00000603541 607 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.88□□□□□ -1.47
FREM3P0C091 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.88□□□□□ -1.47
FREM3P0C091 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
FREM3P0C091 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 CASC19-228ENST00000641414 1684 ntBASIC5.88□□□□□ -1.47
FREM3P0C091 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.88□□□□□ -1.47
FREM3P0C091 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC5.88□□□□□ -1.47
FREM3P0C091 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
FREM3P0C091 AC020658.2-201ENST00000559030 4020 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 CAST-222ENST00000508579 1758 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
FREM3P0C091 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 FABP5P1-201ENST00000423401 411 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 FABP5P2-201ENST00000439042 408 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.87□□□□□ -1.47
FREM3P0C091 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 IGLV3-6-201ENST00000523937 250 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 AP003115.1-201ENST00000569849 463 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 RPSAP75-201ENST00000605848 301 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 CCDC162P-202ENST00000368966 6751 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 AL359976.1-201ENST00000418655 3528 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
FREM3P0C091 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
FREM3P0C091 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 RNA5SP110-201ENST00000362638 115 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 SNORA11.3-201ENST00000408471 128 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 RNA5SP115-201ENST00000411160 107 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 CYCSP52-201ENST00000422857 310 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 GTF2IP14-201ENST00000441415 586 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 RN7SL561P-201ENST00000488553 281 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.87□□□□□ -1.47
FREM3P0C091 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 SNORA11.6-201ENST00000619030 128 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 CAP1P2-201ENST00000417455 1409 ntBASIC5.87□□□□□ -1.47
FREM3P0C091 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
FREM3P0C091 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.87□□□□□ -1.47
FREM3P0C091 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
FREM3P0C091 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
FREM3P0C091 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FREM3P0C091 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.86□□□□□ -1.47
FREM3P0C091 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.86□□□□□ -1.47
FREM3P0C091 RN7SKP121-201ENST00000410842 305 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.86□□□□□ -1.47
FREM3P0C091 GAPDHP59-201ENST00000435908 267 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 AC007383.1-201ENST00000445875 636 ntBASIC5.86□□□□□ -1.47
FREM3P0C091 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
FREM3P0C091 GM2AP2-201ENST00000491764 562 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 695.1 ms