Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL1P09341 NQO1-205ENST00000561500 891 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL1P09341 AC061975.3-201ENST00000583209 244 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 AC011921.2-201ENST00000589465 152 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 AL035410.2-201ENST00000604963 864 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL1P09341 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL1P09341 OR5AU1-204ENST00000641822 1197 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 AC119674.1-217ENST00000641942 1086 ntBASIC4.95□□□□□ -1.62
CXCL1P09341 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL1P09341 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CXCL1P09341 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL1P09341 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CXCL1P09341 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 PARP4P2-201ENST00000446672 3326 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL1P09341 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL1P09341 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL1P09341 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL1P09341 CYCSP17-201ENST00000407870 315 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC4.94□□□□□ -1.62
CXCL1P09341 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 AC092106.2-201ENST00000436597 487 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 KRT8P51-201ENST00000438938 274 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC4.94□□□□□ -1.62
CXCL1P09341 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 RPL23AP80-201ENST00000495605 424 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.94□□□□□ -1.62
CXCL1P09341 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 AC106774.2-201ENST00000510266 406 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 AC017007.1-201ENST00000511960 415 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 RNA5SP318-201ENST00000516352 92 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.94□□□□□ -1.62
CXCL1P09341 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC4.94□□□□□ -1.62
CXCL1P09341 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC4.94□□□□□ -1.62
CXCL1P09341 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 EIF4A3P1-201ENST00000578499 647 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 MIR3689C-201ENST00000581239 72 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL1P09341 COX6CP16-201ENST00000603667 216 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 RN7SL820P-201ENST00000616437 299 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 MIR6834-201ENST00000622807 81 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 AC017037.4-201ENST00000624526 826 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC4.94□□□□□ -1.62
CXCL1P09341 FGL2-202ENST00000637771 989 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.94□□□□□ -1.62
CXCL1P09341 AC124944.3-204ENST00000641191 150 ntBASIC4.94□□□□□ -1.62
CXCL1P09341 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.94□□□□□ -1.62
CXCL1P09341 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.94□□□□□ -1.62
CXCL1P09341 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CXCL1P09341 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.94□□□□□ -1.62
CXCL1P09341 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL1P09341 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL1P09341 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.94□□□□□ -1.62
CXCL1P09341 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.94□□□□□ -1.62
CXCL1P09341 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 ERG-202ENST00000398897 4651 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC090774.4-201ENST00000578888 1372 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AL121839.2-201ENST00000565058 6943 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 MAPK10-328ENST00000641553 4009 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms