Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 U3.14-201ENST00000365363 227 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 SNX18P13-201ENST00000412442 529 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 UBE2V1P14-201ENST00000415815 558 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 OSTCP1-201ENST00000455507 450 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC236972.4-201ENST00000458091 963 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 RN7SL216P-201ENST00000471607 298 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AL928654.1-201ENST00000476081 354 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 PPP1R2P6-201ENST00000478565 588 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC091304.4-201ENST00000565703 620 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 MIR3189-201ENST00000578735 73 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 MIR5705-201ENST00000579870 89 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC122710.3-201ENST00000606566 541 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 BX005040.2-201ENST00000620504 370 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 KDM5DP1-201ENST00000622542 298 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 AC026108.1-201ENST00000635444 547 ntBASIC5.56□□□□□ -1.52
HLA-DQB1P01920 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB1P01920 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AP000473.2-201ENST00000602659 1537 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 RNA5SP453-201ENST00000362503 119 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 SNORD1C-201ENST00000363315 78 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 MRPS21P5-201ENST00000417885 231 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 SNRPEP5-201ENST00000425442 278 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AL590128.1-201ENST00000433407 286 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 RPS21P1-201ENST00000434479 247 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC022415.1-202ENST00000486612 523 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 ST13P12-201ENST00000508958 1094 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC026774.2-201ENST00000513990 1098 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 CYP4F27P-201ENST00000514557 494 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 MTCYBP44-201ENST00000514835 823 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 FRG2MP-201ENST00000613317 856 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 pRNA.9-201ENST00000618609 89 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC125238.2-201ENST00000430003 1440 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms