Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 AL359922.2-201ENST00000581788 3017 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 PABPC1P6-201ENST00000445594 1829 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 RNA5SP156-201ENST00000410250 110 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 YWHAEP1-201ENST00000453697 763 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 CYCSP22-201ENST00000517555 339 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 AL356801.1-201ENST00000559320 294 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 AL136131.3-201ENST00000607600 188 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 OR1N1-202ENST00000619659 939 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 AC027088.4-201ENST00000611559 1947 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 Z93929.1-201ENST00000418200 1475 ntBASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL22A1Q8NFW1 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AC122713.2-201ENST00000624942 3335 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 SNORA70-201ENST00000384436 135 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 RPL35AP3-201ENST00000414680 288 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 CYP4F32P-201ENST00000426492 504 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 BX119917.1-201ENST00000432517 502 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 TRIM60P16-201ENST00000444048 694 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AL445466.1-201ENST00000448432 357 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 IGLV2-28-201ENST00000520681 304 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AC015802.2-201ENST00000589690 189 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 MIR6748-201ENST00000610433 71 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AC023245.2-201ENST00000530760 2978 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 TATDN2P3-201ENST00000452855 3665 ntBASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
COL22A1Q8NFW1 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 AL121835.1-201ENST00000404250 354 ntBASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 GAPDHP58-201ENST00000438477 1006 ntBASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 AL445670.1-201ENST00000618889 801 ntBASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 CASC19-205ENST00000641013 1411 ntBASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL22A1Q8NFW1 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.07
COL22A1Q8NFW1 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms