Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCXQ7RTU7 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC4.42□□□□□ -1.7
SCXQ7RTU7 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 RN7SKP130-201ENST00000364924 301 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 SNORA7A-201ENST00000384765 139 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 MIR199B-201ENST00000384849 110 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 RN7SKP232-201ENST00000410170 290 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 VN1R66P-201ENST00000412929 916 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 RPSAP60-201ENST00000415403 880 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 SPATA20P1-201ENST00000423089 438 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AL121916.1-201ENST00000429405 308 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 GAPDHP34-201ENST00000432112 823 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC114755.4-201ENST00000439114 443 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 E2F6P3-201ENST00000441743 743 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AL031681.1-201ENST00000443304 400 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 OR52E7P-201ENST00000452394 933 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 RN7SL393P-201ENST00000463588 296 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC138517.1-201ENST00000515724 568 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AL683813.2-201ENST00000605245 502 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 MIR6503-201ENST00000622884 86 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC073365.1-203ENST00000641055 1992 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 TPTE2P2-201ENST00000403471 1466 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AKAP17BP-201ENST00000431706 2719 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 AL355377.1-201ENST00000621125 1653 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 AC018628.1-201ENST00000624147 3819 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 DNM1P47-203ENST00000571780 12667 ntBASIC4.41□□□□□ -1.7
SCXQ7RTU7 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCXQ7RTU7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.41□□□□□ -1.7
SCXQ7RTU7 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCXQ7RTU7 AC022034.1-201ENST00000512867 2156 ntBASIC4.4□□□□□ -1.7
SCXQ7RTU7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCXQ7RTU7 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCXQ7RTU7 AC012078.1-201ENST00000405035 1646 ntBASIC4.4□□□□□ -1.7
SCXQ7RTU7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.4□□□□□ -1.7
SCXQ7RTU7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms