Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.04□□□□□ -1.28
YBX1P67809 AL121895.2-201ENST00000619558 447 ntBASIC7.04□□□□□ -1.28
YBX1P67809 AC073534.2-201ENST00000620377 381 ntBASIC7.04□□□□□ -1.28
YBX1P67809 AP003499.2-201ENST00000624100 483 ntBASIC7.04□□□□□ -1.28
YBX1P67809 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.04□□□□□ -1.28
YBX1P67809 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.04□□□□□ -1.28
YBX1P67809 AL590396.3-201ENST00000636334 300 ntBASIC7.04□□□□□ -1.28
YBX1P67809 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.04□□□□□ -1.28
YBX1P67809 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
YBX1P67809 AC009948.3-201ENST00000603415 1798 ntBASIC7.04□□□□□ -1.28
YBX1P67809 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.04□□□□□ -1.28
YBX1P67809 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
YBX1P67809 AC092821.3-202ENST00000641304 2767 ntBASIC7.04□□□□□ -1.28
YBX1P67809 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
YBX1P67809 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
YBX1P67809 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
YBX1P67809 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
YBX1P67809 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
YBX1P67809 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.04□□□□□ -1.28
YBX1P67809 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
YBX1P67809 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
YBX1P67809 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 BRD7P1-201ENST00000557705 1915 ntBASIC7.03□□□□□ -1.28
YBX1P67809 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 AC092821.2-201ENST00000545710 2042 ntBASIC7.03□□□□□ -1.28
YBX1P67809 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
YBX1P67809 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
YBX1P67809 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
YBX1P67809 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 RPL24P7-201ENST00000399435 453 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AL355615.1-201ENST00000406187 641 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AL049697.3-201ENST00000406493 982 ntBASIC7.03□□□□□ -1.28
YBX1P67809 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.03□□□□□ -1.28
YBX1P67809 RPL12P10-201ENST00000413498 498 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 AC008753.1-201ENST00000423096 284 ntBASIC7.03□□□□□ -1.28
YBX1P67809 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC7.03□□□□□ -1.28
YBX1P67809 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 BX119917.1-201ENST00000432517 502 ntBASIC7.03□□□□□ -1.28
YBX1P67809 MORF4L1P5-201ENST00000433352 961 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 AC046176.1-201ENST00000435260 1170 ntBASIC7.03□□□□□ -1.28
YBX1P67809 CR391992.1-201ENST00000438601 394 ntBASIC7.03□□□□□ -1.28
YBX1P67809 MTND2P4-201ENST00000445034 1004 ntBASIC7.03□□□□□ -1.28
YBX1P67809 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC7.03□□□□□ -1.28
YBX1P67809 AC018892.2-201ENST00000457656 693 ntBASIC7.03□□□□□ -1.28
YBX1P67809 RN7SL251P-201ENST00000464175 297 ntBASIC7.03□□□□□ -1.28
YBX1P67809 TUBBP11-201ENST00000472255 252 ntBASIC7.03□□□□□ -1.28
YBX1P67809 RPS14P7-201ENST00000473701 448 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AC090543.1-201ENST00000492168 485 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.03□□□□□ -1.28
YBX1P67809 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 OR7E128P-201ENST00000532736 1024 ntBASIC7.03□□□□□ -1.28
YBX1P67809 GCSHP4-201ENST00000538792 439 ntBASIC7.03□□□□□ -1.28
YBX1P67809 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.03□□□□□ -1.28
YBX1P67809 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.03□□□□□ -1.28
YBX1P67809 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
YBX1P67809 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.03□□□□□ -1.28
YBX1P67809 AGGF1P9-201ENST00000561884 913 ntBASIC7.03□□□□□ -1.28
YBX1P67809 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 AC124856.1-201ENST00000600819 896 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC7.03□□□□□ -1.28
YBX1P67809 AL031429.2-201ENST00000602605 649 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AC107952.2-201ENST00000606048 486 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AC004775.1-201ENST00000607389 753 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7.03□□□□□ -1.28
YBX1P67809 AC245100.7-201ENST00000609678 442 ntBASIC7.03□□□□□ -1.28
YBX1P67809 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
YBX1P67809 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.03□□□□□ -1.28
YBX1P67809 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.03□□□□□ -1.28
YBX1P67809 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
YBX1P67809 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
YBX1P67809 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
YBX1P67809 ENO1P4-201ENST00000416471 1785 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms