Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 BUB1P1-201ENST00000603541 607 ntBASIC5.38□□□□□ -1.55
LMO4P61968 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 AC025171.4-201ENST00000607250 1047 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AL133445.2-201ENST00000611191 527 ntBASIC5.38□□□□□ -1.55
LMO4P61968 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.38□□□□□ -1.55
LMO4P61968 MIR6071-201ENST00000616741 78 ntBASIC5.38□□□□□ -1.55
LMO4P61968 MIR6778-201ENST00000617912 73 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AC005393.1-201ENST00000617916 584 ntBASIC5.38□□□□□ -1.55
LMO4P61968 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC5.38□□□□□ -1.55
LMO4P61968 AP001002.2-201ENST00000625137 386 ntBASIC5.38□□□□□ -1.55
LMO4P61968 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 MIR1910-201ENST00000636955 80 ntBASIC5.38□□□□□ -1.55
LMO4P61968 NEK2P4-201ENST00000425793 1329 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AL512310.3-201ENST00000547023 1335 ntBASIC5.38□□□□□ -1.55
LMO4P61968 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
LMO4P61968 AC020978.8-201ENST00000571975 3022 ntBASIC5.38□□□□□ -1.55
LMO4P61968 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 AKAP17BP-201ENST00000431706 2719 ntBASIC5.38□□□□□ -1.55
LMO4P61968 AC099654.3-201ENST00000447087 1546 ntBASIC5.38□□□□□ -1.55
LMO4P61968 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMO4P61968 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 SPATA31B1P-201ENST00000434692 4016 ntBASIC5.37□□□□□ -1.55
LMO4P61968 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LMO4P61968 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 AL137918.1-201ENST00000624542 1922 ntBASIC5.37□□□□□ -1.55
LMO4P61968 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 AL139805.1-201ENST00000407837 289 ntBASIC5.37□□□□□ -1.55
LMO4P61968 DHFRP2-201ENST00000414224 547 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 AC008753.1-201ENST00000423096 284 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 AC091390.2-201ENST00000432573 374 ntBASIC5.37□□□□□ -1.55
LMO4P61968 PSMD10P2-201ENST00000432890 672 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AC007679.3-201ENST00000434035 414 ntBASIC5.37□□□□□ -1.55
LMO4P61968 GTF2IP14-201ENST00000441415 586 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 HMGN1P17-201ENST00000513734 295 ntBASIC5.37□□□□□ -1.55
LMO4P61968 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 AC002519.2-203ENST00000567043 837 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.37□□□□□ -1.55
LMO4P61968 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 AL157899.1-201ENST00000604110 936 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AC073046.2-201ENST00000604756 527 ntBASIC5.37□□□□□ -1.55
LMO4P61968 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.37□□□□□ -1.55
LMO4P61968 TSHZ2-205ENST00000626626 670 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.37□□□□□ -1.55
LMO4P61968 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 PRNCR1-201ENST00000635449 12727 ntBASIC5.37□□□□□ -1.55
LMO4P61968 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 IFIT1P1-201ENST00000400497 1449 ntBASIC5.37□□□□□ -1.55
LMO4P61968 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.37□□□□□ -1.55
LMO4P61968 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LMO4P61968 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 AL359694.2-201ENST00000567753 1615 ntBASIC5.37□□□□□ -1.55
LMO4P61968 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 AC009166.2-201ENST00000624410 2833 ntBASIC5.37□□□□□ -1.55
LMO4P61968 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.37□□□□□ -1.55
LMO4P61968 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms