Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RNU2-5P-201ENST00000410533 180 ntBASIC7.69□□□□□ -1.18
PMS1P54277 TMA16P2-201ENST00000413187 601 ntBASIC7.69□□□□□ -1.18
PMS1P54277 AC096644.3-201ENST00000416788 338 ntBASIC7.69□□□□□ -1.18
PMS1P54277 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC7.69□□□□□ -1.18
PMS1P54277 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.69□□□□□ -1.18
PMS1P54277 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.69□□□□□ -1.18
PMS1P54277 ZNF885P-201ENST00000420174 1098 ntBASIC7.69□□□□□ -1.18
PMS1P54277 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 AC115285.1-201ENST00000424879 736 ntBASIC7.69□□□□□ -1.18
PMS1P54277 AC134879.1-201ENST00000426062 394 ntBASIC7.69□□□□□ -1.18
PMS1P54277 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.69□□□□□ -1.18
PMS1P54277 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.69□□□□□ -1.18
PMS1P54277 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 SCDP1-201ENST00000455244 1081 ntBASIC7.69□□□□□ -1.18
PMS1P54277 SNORA35.1-201ENST00000458908 128 ntBASIC7.69□□□□□ -1.18
PMS1P54277 RPL34P34-201ENST00000465389 354 ntBASIC7.69□□□□□ -1.18
PMS1P54277 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC7.69□□□□□ -1.18
PMS1P54277 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.69□□□□□ -1.18
PMS1P54277 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 AC121161.1-201ENST00000510606 652 ntBASIC7.69□□□□□ -1.18
PMS1P54277 SCARNA6-201ENST00000515982 265 ntBASIC7.69□□□□□ -1.18
PMS1P54277 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.69□□□□□ -1.18
PMS1P54277 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 MIR4685-201ENST00000578185 69 ntBASIC7.69□□□□□ -1.18
PMS1P54277 SNORA70D-201ENST00000578836 135 ntBASIC7.69□□□□□ -1.18
PMS1P54277 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.69□□□□□ -1.18
PMS1P54277 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
PMS1P54277 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
PMS1P54277 AL451086.1-201ENST00000605596 223 ntBASIC7.69□□□□□ -1.18
PMS1P54277 AL157392.4-201ENST00000609756 345 ntBASIC7.69□□□□□ -1.18
PMS1P54277 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.69□□□□□ -1.18
PMS1P54277 AP002791.1-201ENST00000623291 381 ntBASIC7.69□□□□□ -1.18
PMS1P54277 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.69□□□□□ -1.18
PMS1P54277 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.69□□□□□ -1.18
PMS1P54277 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 CDY19P-201ENST00000411668 1613 ntBASIC7.69□□□□□ -1.18
PMS1P54277 CDY18P-201ENST00000438294 1609 ntBASIC7.69□□□□□ -1.18
PMS1P54277 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.69□□□□□ -1.18
PMS1P54277 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
PMS1P54277 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.69□□□□□ -1.18
PMS1P54277 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.69□□□□□ -1.18
PMS1P54277 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PMS1P54277 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PMS1P54277 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PMS1P54277 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PMS1P54277 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
PMS1P54277 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PMS1P54277 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PMS1P54277 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PMS1P54277 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PMS1P54277 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PMS1P54277 ZNF602P-201ENST00000405929 924 ntBASIC7.68□□□□□ -1.18
PMS1P54277 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC7.68□□□□□ -1.18
PMS1P54277 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
PMS1P54277 AL606495.1-201ENST00000422100 813 ntBASIC7.68□□□□□ -1.18
PMS1P54277 FABP5P1-201ENST00000423401 411 ntBASIC7.68□□□□□ -1.18
PMS1P54277 PTP4A1P7-201ENST00000423476 514 ntBASIC7.68□□□□□ -1.18
PMS1P54277 RPL14P5-201ENST00000436474 730 ntBASIC7.68□□□□□ -1.18
PMS1P54277 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PMS1P54277 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC7.68□□□□□ -1.18
PMS1P54277 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.68□□□□□ -1.18
PMS1P54277 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.68□□□□□ -1.18
PMS1P54277 GAPDHP53-201ENST00000458397 924 ntBASIC7.68□□□□□ -1.18
PMS1P54277 AC104629.2-201ENST00000468627 598 ntBASIC7.68□□□□□ -1.18
PMS1P54277 AC126615.1-201ENST00000470084 630 ntBASIC7.68□□□□□ -1.18
PMS1P54277 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.68□□□□□ -1.18
PMS1P54277 RN7SL563P-201ENST00000481233 298 ntBASIC7.68□□□□□ -1.18
PMS1P54277 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
PMS1P54277 NACAP6-201ENST00000509572 622 ntBASIC7.68□□□□□ -1.18
PMS1P54277 FABP5P6-201ENST00000510588 409 ntBASIC7.68□□□□□ -1.18
PMS1P54277 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.68□□□□□ -1.18
PMS1P54277 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.68□□□□□ -1.18
PMS1P54277 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.68□□□□□ -1.18
PMS1P54277 AC093014.1-201ENST00000548926 724 ntBASIC7.68□□□□□ -1.18
PMS1P54277 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.68□□□□□ -1.18
PMS1P54277 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.68□□□□□ -1.18
PMS1P54277 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC7.68□□□□□ -1.18
PMS1P54277 AC023824.3-201ENST00000569003 562 ntBASIC7.68□□□□□ -1.18
PMS1P54277 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.68□□□□□ -1.18
PMS1P54277 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.68□□□□□ -1.18
PMS1P54277 AC005242.1-201ENST00000585658 438 ntBASIC7.68□□□□□ -1.18
PMS1P54277 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.68□□□□□ -1.18
PMS1P54277 HMGB1P51-201ENST00000605166 638 ntBASIC7.68□□□□□ -1.18
PMS1P54277 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.68□□□□□ -1.18
PMS1P54277 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms