Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMARCA4P51532 SNORA43.1-201ENST00000364863 140 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 BX119321.1-201ENST00000428912 797 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 GAPDHP23-201ENST00000444823 993 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC11.22□□□□□ -0.61
SMARCA4P51532 GAS5-218ENST00000448718 565 ntTSL 2 BASIC11.22□□□□□ -0.61
SMARCA4P51532 SNORA70.20-201ENST00000516848 126 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 DCN-209ENST00000546745 1026 ntTSL 3 BASIC11.22□□□□□ -0.61
SMARCA4P51532 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC11.22□□□□□ -0.61
SMARCA4P51532 AC119674.1-204ENST00000641348 1343 ntBASIC11.22□□□□□ -0.61
SMARCA4P51532 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SMARCA4P51532 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC11.22□□□□□ -0.61
SMARCA4P51532 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SMARCA4P51532 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SMARCA4P51532 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC11.22□□□□□ -0.61
SMARCA4P51532 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SMARCA4P51532 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC11.21□□□□□ -0.61
SMARCA4P51532 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
SMARCA4P51532 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
SMARCA4P51532 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
SMARCA4P51532 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC11.21□□□□□ -0.61
SMARCA4P51532 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC11.21□□□□□ -0.61
SMARCA4P51532 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 RNU6-171P-201ENST00000384354 107 ntBASIC11.21□□□□□ -0.61
SMARCA4P51532 MIR105-2-201ENST00000385083 81 ntBASIC11.21□□□□□ -0.61
SMARCA4P51532 LSM5-203ENST00000409782 649 ntTSL 5 BASIC11.21□□□□□ -0.61
SMARCA4P51532 KIF4CP-201ENST00000422742 1279 ntBASIC11.21□□□□□ -0.61
SMARCA4P51532 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC11.21□□□□□ -0.61
SMARCA4P51532 RPL36AP39-201ENST00000445859 318 ntBASIC11.21□□□□□ -0.61
SMARCA4P51532 AC011225.1-201ENST00000457751 369 ntBASIC11.21□□□□□ -0.61
SMARCA4P51532 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC11.21□□□□□ -0.61
SMARCA4P51532 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
SMARCA4P51532 AL359704.2-201ENST00000604335 521 ntBASIC11.21□□□□□ -0.61
SMARCA4P51532 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC11.21□□□□□ -0.61
SMARCA4P51532 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC11.21□□□□□ -0.61
SMARCA4P51532 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC11.21□□□□□ -0.61
SMARCA4P51532 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SMARCA4P51532 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC11.21□□□□□ -0.61
SMARCA4P51532 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SMARCA4P51532 Z97832.2-201ENST00000605896 4261 ntBASIC11.21□□□□□ -0.62
SMARCA4P51532 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMARCA4P51532 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SMARCA4P51532 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMARCA4P51532 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SMARCA4P51532 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
SMARCA4P51532 CRP-204ENST00000368112 787 ntTSL 2 BASIC11.2□□□□□ -0.62
SMARCA4P51532 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 AL391422.1-201ENST00000402155 436 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC11.2□□□□□ -0.62
SMARCA4P51532 RBPJP7-201ENST00000442803 1447 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC11.2□□□□□ -0.62
SMARCA4P51532 RBPJP5-201ENST00000449433 1447 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SMARCA4P51532 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC11.2□□□□□ -0.62
SMARCA4P51532 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 BICD1-206ENST00000551086 423 ntTSL 3 BASIC11.2□□□□□ -0.62
SMARCA4P51532 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SMARCA4P51532 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
SMARCA4P51532 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC11.2□□□□□ -0.62
SMARCA4P51532 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC11.2□□□□□ -0.62
SMARCA4P51532 RPS2P45-201ENST00000469997 2057 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AC027279.4-201ENST00000624371 2072 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AC027088.4-201ENST00000611559 1947 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SMARCA4P51532 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 AC104964.2-201ENST00000562242 4641 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
SMARCA4P51532 RPL35AP31-201ENST00000418340 337 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AC008753.1-201ENST00000423096 284 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC11.2□□□□□ -0.62
SMARCA4P51532 AC245884.2-201ENST00000426257 404 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC11.2□□□□□ -0.62
SMARCA4P51532 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC11.2□□□□□ -0.62
SMARCA4P51532 TRIM60P16-201ENST00000444048 694 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AC073909.1-201ENST00000447112 999 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AC006539.1-201ENST00000481419 501 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 MTND6P16-201ENST00000504006 520 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SMARCA4P51532 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC11.2□□□□□ -0.62
SMARCA4P51532 AL356801.1-201ENST00000559320 294 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC11.2□□□□□ -0.62
SMARCA4P51532 IMMP1LP3-201ENST00000604197 224 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 SUMO2P15-201ENST00000604285 278 ntBASIC11.2□□□□□ -0.62
SMARCA4P51532 AL136131.3-201ENST00000607600 188 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms