Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
COL15A1P39059 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.25□□□□□ -1.09
COL15A1P39059 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
COL15A1P39059 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
COL15A1P39059 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 SNORA51.9-201ENST00000384295 124 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 AL049697.3-201ENST00000406493 982 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 RPS3P2-201ENST00000421346 701 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 RPL7AP14-201ENST00000424041 802 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC8.24□□□□□ -1.09
COL15A1P39059 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.24□□□□□ -1.09
COL15A1P39059 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.24□□□□□ -1.09
COL15A1P39059 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.24□□□□□ -1.09
COL15A1P39059 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.24□□□□□ -1.09
COL15A1P39059 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.24□□□□□ -1.09
COL15A1P39059 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.24□□□□□ -1.09
COL15A1P39059 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
COL15A1P39059 MRPS21P8-201ENST00000569196 235 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.24□□□□□ -1.09
COL15A1P39059 AC092266.1-201ENST00000610958 165 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.24□□□□□ -1.09
COL15A1P39059 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.24□□□□□ -1.09
COL15A1P39059 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.24□□□□□ -1.09
COL15A1P39059 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
COL15A1P39059 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.24□□□□□ -1.09
COL15A1P39059 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 CTAGE11P-201ENST00000451540 2353 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
COL15A1P39059 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.24□□□□□ -1.09
COL15A1P39059 AL359694.2-201ENST00000567753 1615 ntBASIC8.24□□□□□ -1.09
COL15A1P39059 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL15A1P39059 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC8.23□□□□□ -1.09
COL15A1P39059 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.23□□□□□ -1.09
COL15A1P39059 RN7SKP281-201ENST00000410472 352 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 MTATP6P19-201ENST00000413797 659 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 MED28P4-201ENST00000433137 572 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.23□□□□□ -1.09
COL15A1P39059 AL391987.1-201ENST00000441025 200 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 AL645936.1-201ENST00000441979 518 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 RPL7P51-201ENST00000490532 749 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 AC104109.1-201ENST00000498563 436 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC8.23□□□□□ -1.09
COL15A1P39059 SNORA81.2-201ENST00000516868 170 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 AC027369.2-201ENST00000528030 440 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 MIR3614-201ENST00000581261 86 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 AC015818.6-201ENST00000584274 634 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.23□□□□□ -1.09
COL15A1P39059 AC073389.3-201ENST00000609434 935 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 AC005393.1-201ENST00000617916 584 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.23□□□□□ -1.09
COL15A1P39059 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
COL15A1P39059 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.23□□□□□ -1.09
COL15A1P39059 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.23□□□□□ -1.09
COL15A1P39059 AC093225.1-201ENST00000506867 1408 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
COL15A1P39059 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.23□□□□□ -1.09
COL15A1P39059 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
COL15A1P39059 NCOA4P3-201ENST00000513203 1877 ntBASIC8.23□□□□□ -1.09
COL15A1P39059 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.23□□□□□ -1.09
COL15A1P39059 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL15A1P39059 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.23□□□□□ -1.09
COL15A1P39059 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 PPIAP27-201ENST00000453800 265 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 HLA-DPA3-207ENST00000454398 229 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 BLNK-209ENST00000495266 440 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 AC025458.1-201ENST00000506046 166 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 LDHAP1-201ENST00000509421 992 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 AC011411.1-201ENST00000509592 876 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.22□□□□□ -1.09
COL15A1P39059 LINC00556-201ENST00000569603 412 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 AC008521.2-201ENST00000591021 259 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms