Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHMT2P34897 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 AL451142.1-201ENST00000375867 775 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.44□□□□□ -1.38
SHMT2P34897 MTND4LP17-201ENST00000414607 293 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.44□□□□□ -1.38
SHMT2P34897 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
SHMT2P34897 AC064862.5-201ENST00000440618 334 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.44□□□□□ -1.38
SHMT2P34897 AL031681.1-201ENST00000443304 400 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 TVP23CP1-201ENST00000450317 639 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.44□□□□□ -1.38
SHMT2P34897 OR9G2P-201ENST00000533326 880 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHMT2P34897 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.44□□□□□ -1.38
SHMT2P34897 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 AP003115.1-201ENST00000569849 463 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.44□□□□□ -1.38
SHMT2P34897 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.44□□□□□ -1.38
SHMT2P34897 MIR6885-201ENST00000612241 66 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 AL354718.1-201ENST00000619764 589 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 AC068213.1-201ENST00000625124 226 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.44□□□□□ -1.38
SHMT2P34897 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.44□□□□□ -1.38
SHMT2P34897 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHMT2P34897 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHMT2P34897 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.44□□□□□ -1.38
SHMT2P34897 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SHMT2P34897 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHMT2P34897 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.44□□□□□ -1.38
SHMT2P34897 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SHMT2P34897 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 AC009120.2-204ENST00000621548 2032 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SHMT2P34897 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.43□□□□□ -1.38
SHMT2P34897 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.43□□□□□ -1.38
SHMT2P34897 RANP6-201ENST00000413691 644 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.43□□□□□ -1.38
SHMT2P34897 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.43□□□□□ -1.38
SHMT2P34897 GAPDHP19-201ENST00000431768 1005 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.43□□□□□ -1.38
SHMT2P34897 GAPDHP33-201ENST00000443168 1013 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 RN7SL561P-201ENST00000488553 281 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.43□□□□□ -1.38
SHMT2P34897 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.43□□□□□ -1.38
SHMT2P34897 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.43□□□□□ -1.38
SHMT2P34897 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.43□□□□□ -1.38
SHMT2P34897 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.43□□□□□ -1.38
SHMT2P34897 AC245052.7-201ENST00000601161 359 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 AL049840.5-201ENST00000602827 552 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
SHMT2P34897 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 SNX18P10-201ENST00000625014 519 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.43□□□□□ -1.38
SHMT2P34897 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SHMT2P34897 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.43□□□□□ -1.38
SHMT2P34897 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 AC074141.1-201ENST00000588129 2995 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHMT2P34897 SMG1P5-202ENST00000529428 4219 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 SMG1P2-201ENST00000566127 4221 ntBASIC6.43□□□□□ -1.38
SHMT2P34897 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SHMT2P34897 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SHMT2P34897 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SHMT2P34897 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 AL662795.2-201ENST00000624252 3706 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 PPIAP24-201ENST00000328558 471 ntBASIC6.42□□□□□ -1.38
SHMT2P34897 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.42□□□□□ -1.38
SHMT2P34897 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHMT2P34897 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms