Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 NDUFA5P11-201ENST00000567995 343 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.89□□□□□ -1.15
CNGA1P29973 AC084036.1-201ENST00000609190 508 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.89□□□□□ -1.15
CNGA1P29973 AL356752.1-201ENST00000615844 593 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CNGA1P29973 AL121936.2-201ENST00000641935 662 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 AC073342.2-201ENST00000595842 1800 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNGA1P29973 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CNGA1P29973 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.89□□□□□ -1.15
CNGA1P29973 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.89□□□□□ -1.15
CNGA1P29973 AL049634.1-201ENST00000453770 1720 ntBASIC7.89□□□□□ -1.15
CNGA1P29973 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.89□□□□□ -1.15
CNGA1P29973 ATP5BP1-201ENST00000411980 1574 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.88□□□□□ -1.15
CNGA1P29973 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CNGA1P29973 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 NCOA4P3-201ENST00000513203 1877 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.88□□□□□ -1.15
CNGA1P29973 RNA5SP115-201ENST00000411160 107 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 AL357078.2-201ENST00000416486 427 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.88□□□□□ -1.15
CNGA1P29973 NUCKS1P1-201ENST00000452067 703 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 AL390728.3-201ENST00000452704 270 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 AKR1D1P1-201ENST00000457236 936 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 RPL34P34-201ENST00000465389 354 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 AC009879.1-201ENST00000520029 839 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 IGLVV-66-201ENST00000523818 341 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 OR4A46P-201ENST00000527255 933 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 AC005000.1-201ENST00000536192 288 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.88□□□□□ -1.15
CNGA1P29973 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.88□□□□□ -1.15
CNGA1P29973 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.88□□□□□ -1.15
CNGA1P29973 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.88□□□□□ -1.15
CNGA1P29973 AC011921.2-201ENST00000589465 152 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 AL078623.1-201ENST00000602702 907 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.88□□□□□ -1.15
CNGA1P29973 AC097641.3-201ENST00000613523 464 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 AL512506.1-201ENST00000613918 449 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 KARSP2-201ENST00000415696 1639 ntBASIC7.88□□□□□ -1.15
CNGA1P29973 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNGA1P29973 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNGA1P29973 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.88□□□□□ -1.15
CNGA1P29973 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.88□□□□□ -1.15
CNGA1P29973 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.87□□□□□ -1.15
CNGA1P29973 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.87□□□□□ -1.15
CNGA1P29973 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.87□□□□□ -1.15
CNGA1P29973 ENO1P4-201ENST00000416471 1785 ntBASIC7.87□□□□□ -1.15
CNGA1P29973 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 AC092725.2-201ENST00000567658 1389 ntBASIC7.87□□□□□ -1.15
CNGA1P29973 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CNGA1P29973 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.87□□□□□ -1.15
CNGA1P29973 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CNGA1P29973 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.87□□□□□ -1.15
CNGA1P29973 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
CNGA1P29973 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CNGA1P29973 SNORD35A-201ENST00000363389 86 ntBASIC7.87□□□□□ -1.15
CNGA1P29973 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CNGA1P29973 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CNGA1P29973 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.87□□□□□ -1.15
CNGA1P29973 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms