Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CD40P25942 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.37□□□□□ -1.39
CD40P25942 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 AC125232.1-201ENST00000452554 1408 ntBASIC6.37□□□□□ -1.39
CD40P25942 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CD40P25942 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CD40P25942 RNA5SP105-201ENST00000391123 113 ntBASIC6.37□□□□□ -1.39
CD40P25942 MCTS2P-201ENST00000394552 546 ntBASIC6.37□□□□□ -1.39
CD40P25942 RNA5SP177-201ENST00000410122 107 ntBASIC6.37□□□□□ -1.39
CD40P25942 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 RPS3AP37-201ENST00000419176 745 ntBASIC6.37□□□□□ -1.39
CD40P25942 AL022100.1-202ENST00000421214 548 ntBASIC6.37□□□□□ -1.39
CD40P25942 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.37□□□□□ -1.39
CD40P25942 OR7E117P-201ENST00000422682 1112 ntBASIC6.37□□□□□ -1.39
CD40P25942 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 AC073052.1-201ENST00000440417 714 ntBASIC6.37□□□□□ -1.39
CD40P25942 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 RHEBP1-201ENST00000448647 556 ntBASIC6.37□□□□□ -1.39
CD40P25942 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 RN7SL251P-201ENST00000464175 297 ntBASIC6.37□□□□□ -1.39
CD40P25942 RN7SL751P-201ENST00000473281 284 ntBASIC6.37□□□□□ -1.39
CD40P25942 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 AC095052.1-201ENST00000509955 863 ntBASIC6.37□□□□□ -1.39
CD40P25942 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 OR5M4P-201ENST00000529436 925 ntBASIC6.37□□□□□ -1.39
CD40P25942 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.37□□□□□ -1.39
CD40P25942 ZNF321P-202ENST00000550843 495 ntBASIC6.37□□□□□ -1.39
CD40P25942 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.37□□□□□ -1.39
CD40P25942 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.37□□□□□ -1.39
CD40P25942 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.37□□□□□ -1.39
CD40P25942 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 FAM106CP-201ENST00000582212 507 ntBASIC6.37□□□□□ -1.39
CD40P25942 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 AC097376.1-201ENST00000602907 997 ntBASIC6.37□□□□□ -1.39
CD40P25942 Z94722.1-201ENST00000604328 474 ntBASIC6.37□□□□□ -1.39
CD40P25942 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 AC012557.1-201ENST00000607115 611 ntBASIC6.37□□□□□ -1.39
CD40P25942 AC097381.3-201ENST00000608962 462 ntBASIC6.37□□□□□ -1.39
CD40P25942 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.37□□□□□ -1.39
CD40P25942 AL159169.2-201ENST00000610061 1269 ntBASIC6.37□□□□□ -1.39
CD40P25942 AC025162.2-201ENST00000619602 560 ntBASIC6.37□□□□□ -1.39
CD40P25942 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 AL590396.3-201ENST00000636334 300 ntBASIC6.37□□□□□ -1.39
CD40P25942 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.37□□□□□ -1.39
CD40P25942 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 THAP12P7-201ENST00000520248 2290 ntBASIC6.37□□□□□ -1.39
CD40P25942 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.37□□□□□ -1.39
CD40P25942 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CD40P25942 AC009948.5-201ENST00000624360 4406 ntBASIC6.36□□□□□ -1.39
CD40P25942 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.36□□□□□ -1.39
CD40P25942 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.36□□□□□ -1.39
CD40P25942 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.36□□□□□ -1.39
CD40P25942 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.36□□□□□ -1.39
CD40P25942 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD40P25942 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD40P25942 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CD40P25942 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.36□□□□□ -1.39
CD40P25942 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.36□□□□□ -1.39
CD40P25942 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD40P25942 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD40P25942 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CD40P25942 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CD40P25942 NXF4-202ENST00000416098 1465 ntBASIC6.36□□□□□ -1.39
CD40P25942 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD40P25942 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.36□□□□□ -1.39
CD40P25942 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CD40P25942 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC6.36□□□□□ -1.39
CD40P25942 TRIM64EP-201ENST00000531233 1307 ntBASIC6.36□□□□□ -1.39
CD40P25942 AC245505.2-201ENST00000553572 3055 ntBASIC6.36□□□□□ -1.39
CD40P25942 MAPK10-281ENST00000641170 3070 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms