Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC092681.3-201ENST00000609463 678 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 OR8B9P-202ENST00000642028 5216 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
POLR2AP24928 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.52□□□□□ -1.2
POLR2AP24928 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.52□□□□□ -1.2
POLR2AP24928 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.52□□□□□ -1.21
POLR2AP24928 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
POLR2AP24928 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.52□□□□□ -1.21
POLR2AP24928 SUMO2P3-201ENST00000438311 288 ntBASIC7.52□□□□□ -1.21
POLR2AP24928 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.52□□□□□ -1.21
POLR2AP24928 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC7.52□□□□□ -1.21
POLR2AP24928 SNORA26.10-201ENST00000516427 141 ntBASIC7.52□□□□□ -1.21
POLR2AP24928 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.52□□□□□ -1.21
POLR2AP24928 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 AL513548.2-201ENST00000602994 1207 ntBASIC7.52□□□□□ -1.21
POLR2AP24928 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC7.52□□□□□ -1.21
POLR2AP24928 AL355816.2-201ENST00000610049 647 ntBASIC7.52□□□□□ -1.21
POLR2AP24928 MIR6809-201ENST00000612189 116 ntBASIC7.52□□□□□ -1.21
POLR2AP24928 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.52□□□□□ -1.21
POLR2AP24928 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.52□□□□□ -1.21
POLR2AP24928 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.52□□□□□ -1.21
POLR2AP24928 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.52□□□□□ -1.21
POLR2AP24928 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
POLR2AP24928 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
POLR2AP24928 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
POLR2AP24928 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
POLR2AP24928 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.51□□□□□ -1.21
POLR2AP24928 AC130360.1-201ENST00000425489 1117 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC245884.2-201ENST00000426257 404 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC023141.3-201ENST00000436698 278 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 SOCS5P1-201ENST00000440415 949 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.51□□□□□ -1.21
POLR2AP24928 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 IGHV3-57-201ENST00000520143 280 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC130365.2-201ENST00000525882 1201 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.51□□□□□ -1.21
POLR2AP24928 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.51□□□□□ -1.21
POLR2AP24928 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.51□□□□□ -1.21
POLR2AP24928 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
POLR2AP24928 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
POLR2AP24928 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 RBMY1HP-201ENST00000382759 1389 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 AC007993.1-201ENST00000621298 2430 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.51□□□□□ -1.21
POLR2AP24928 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
POLR2AP24928 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.51□□□□□ -1.21
POLR2AP24928 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 RNU6-171P-201ENST00000384354 107 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 AL645936.1-201ENST00000441979 518 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC064862.4-201ENST00000442180 334 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC7.51□□□□□ -1.21
POLR2AP24928 UBE2V2P4-201ENST00000447495 259 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 RPL34P33-201ENST00000486062 334 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 RN7SL714P-201ENST00000487050 298 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC7.51□□□□□ -1.21
POLR2AP24928 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.51□□□□□ -1.21
POLR2AP24928 TPRX1P1-201ENST00000557620 319 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AC016252.1-201ENST00000609721 474 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 AL136295.6-201ENST00000610486 658 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 RN7SL787P-201ENST00000613000 284 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 PSG10P-201ENST00000501199 1500 ntBASIC7.51□□□□□ -1.21
POLR2AP24928 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
POLR2AP24928 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms