Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CDY9P-201ENST00000451397 1580 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 AC010624.4-201ENST00000597606 1351 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 AL359976.1-201ENST00000418655 3528 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL3L1P16619 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL3L1P16619 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 SNORD35A-201ENST00000363389 86 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 AC083862.1-201ENST00000427378 1242 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 OR6R1P-201ENST00000431838 940 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AC064862.5-201ENST00000440618 334 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 AC245291.3-201ENST00000443400 292 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 CEACAMP11-201ENST00000455211 583 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 RBMY2HP-201ENST00000457961 720 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AC091965.3-201ENST00000506236 208 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 AC138517.1-201ENST00000515724 568 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.33□□□□□ -1.56
CCL3L1P16619 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCL3L1P16619 RPL3P13-201ENST00000550415 216 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AL589743.6-201ENST00000611025 117 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AC099654.15-201ENST00000639802 509 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 AL157831.2-201ENST00000564681 3095 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL3L1P16619 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCL3L1P16619 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCL3L1P16619 CDY10P-201ENST00000452415 1567 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC5.33□□□□□ -1.56
CCL3L1P16619 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AP002991.2-201ENST00000623807 2801 ntBASIC5.33□□□□□ -1.56
CCL3L1P16619 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CCL3L1P16619 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL3L1P16619 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCL3L1P16619 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 FAM32BP-201ENST00000344033 333 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AL391419.1-201ENST00000398901 1275 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 RN7SKP129-201ENST00000410288 299 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 RN7SKP281-201ENST00000410472 352 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 GPN3P1-201ENST00000423883 535 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL3L1P16619 GAPDHP19-201ENST00000431768 1005 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL3L1P16619 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL3L1P16619 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AC234771.2-201ENST00000445718 597 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 RPS18P1-201ENST00000447840 458 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AC073476.1-201ENST00000452854 407 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AC099670.1-201ENST00000455141 783 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 CCNJP2-201ENST00000457810 1163 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AC092824.1-201ENST00000483524 576 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL3L1P16619 H3F3AP3-201ENST00000497682 407 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AC018645.1-201ENST00000505003 109 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 NACAP5-201ENST00000509863 636 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 RN7SKP98-201ENST00000517070 156 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AL133399.1-201ENST00000527476 298 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.32□□□□□ -1.56
CCL3L1P16619 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AC025283.1-201ENST00000572039 734 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 ARGFXP2-201ENST00000579304 949 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms