Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.07□□□□□ -1.28
RB1P06400 AC009166.2-201ENST00000624410 2833 ntBASIC7.07□□□□□ -1.28
RB1P06400 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.07□□□□□ -1.28
RB1P06400 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 COX6B1P3-201ENST00000312310 260 ntBASIC7.07□□□□□ -1.28
RB1P06400 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.07□□□□□ -1.28
RB1P06400 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.07□□□□□ -1.28
RB1P06400 AL359092.1-201ENST00000417156 265 ntBASIC7.07□□□□□ -1.28
RB1P06400 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.07□□□□□ -1.28
RB1P06400 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.07□□□□□ -1.28
RB1P06400 AC084754.1-201ENST00000463466 464 ntBASIC7.07□□□□□ -1.28
RB1P06400 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.07□□□□□ -1.28
RB1P06400 RPS4XP23-201ENST00000487801 237 ntBASIC7.07□□□□□ -1.28
RB1P06400 AP002453.1-201ENST00000492327 668 ntBASIC7.07□□□□□ -1.28
RB1P06400 AC055733.3-201ENST00000505214 523 ntBASIC7.07□□□□□ -1.28
RB1P06400 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 SCARNA5-201ENST00000516201 276 ntBASIC7.07□□□□□ -1.28
RB1P06400 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.07□□□□□ -1.28
RB1P06400 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.07□□□□□ -1.28
RB1P06400 AC008055.1-201ENST00000547032 609 ntBASIC7.07□□□□□ -1.28
RB1P06400 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 AC091167.5-201ENST00000605689 894 ntBASIC7.07□□□□□ -1.28
RB1P06400 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.07□□□□□ -1.28
RB1P06400 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 AC074141.1-201ENST00000588129 2995 ntBASIC7.07□□□□□ -1.28
RB1P06400 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.07□□□□□ -1.28
RB1P06400 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RB1P06400 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RB1P06400 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.07□□□□□ -1.28
RB1P06400 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RB1P06400 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.06□□□□□ -1.28
RB1P06400 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 AC005614.1-201ENST00000598952 3653 ntBASIC7.06□□□□□ -1.28
RB1P06400 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 CASC19-246ENST00000641625 1606 ntBASIC7.06□□□□□ -1.28
RB1P06400 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
RB1P06400 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RB1P06400 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 RN7SKP206-201ENST00000410823 293 ntBASIC7.06□□□□□ -1.28
RB1P06400 AL691447.1-201ENST00000419456 387 ntBASIC7.06□□□□□ -1.28
RB1P06400 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.06□□□□□ -1.28
RB1P06400 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.06□□□□□ -1.28
RB1P06400 AC010240.2-201ENST00000445363 1205 ntBASIC7.06□□□□□ -1.28
RB1P06400 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.06□□□□□ -1.28
RB1P06400 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 GM2AP2-201ENST00000491764 562 ntBASIC7.06□□□□□ -1.28
RB1P06400 RBBP4P1-201ENST00000502424 1276 ntBASIC7.06□□□□□ -1.28
RB1P06400 LSM3P4-201ENST00000502948 309 ntBASIC7.06□□□□□ -1.28
RB1P06400 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.06□□□□□ -1.28
RB1P06400 COX6B1P4-201ENST00000519826 484 ntBASIC7.06□□□□□ -1.28
RB1P06400 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.06□□□□□ -1.28
RB1P06400 NANOGNBP2-201ENST00000544753 553 ntBASIC7.06□□□□□ -1.28
RB1P06400 ULK4P1-202ENST00000565174 503 ntBASIC7.06□□□□□ -1.28
RB1P06400 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 AC090826.1-203ENST00000569235 490 ntBASIC7.06□□□□□ -1.28
RB1P06400 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.06□□□□□ -1.28
RB1P06400 AP003072.5-201ENST00000623872 773 ntBASIC7.06□□□□□ -1.28
RB1P06400 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.06□□□□□ -1.28
RB1P06400 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RB1P06400 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 MAPK10-270ENST00000641102 3538 ntBASIC7.06□□□□□ -1.28
RB1P06400 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.06□□□□□ -1.28
RB1P06400 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RB1P06400 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RB1P06400 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms