Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 SNORA74A-201ENST00000364089 198 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SPTA1P02549 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.01□□□□□ -1.45
SPTA1P02549 RARRES2P3-201ENST00000457739 473 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 RN7SKP35-201ENST00000517210 151 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.01□□□□□ -1.45
SPTA1P02549 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 AC073488.9-201ENST00000631601 754 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 AL358913.2-201ENST00000553881 1548 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 Z99129.4-201ENST00000624649 2435 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 AL513325.1-201ENST00000417716 1034 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.01□□□□□ -1.45
SPTA1P02549 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.01□□□□□ -1.45
SPTA1P02549 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.01□□□□□ -1.45
SPTA1P02549 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.01□□□□□ -1.45
SPTA1P02549 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC6.01□□□□□ -1.45
SPTA1P02549 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 R3HDM2P1-201ENST00000505381 1960 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SPTA1P02549 AC117409.1-201ENST00000470499 1310 ntBASIC6.01□□□□□ -1.45
SPTA1P02549 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.01□□□□□ -1.45
SPTA1P02549 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 AP000281.1-201ENST00000444036 316 ntBASIC6□□□□□ -1.45
SPTA1P02549 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6□□□□□ -1.45
SPTA1P02549 AP003396.4-201ENST00000527574 265 ntBASIC6□□□□□ -1.45
SPTA1P02549 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6□□□□□ -1.45
SPTA1P02549 AC007346.1-201ENST00000569208 867 ntBASIC6□□□□□ -1.45
SPTA1P02549 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6□□□□□ -1.45
SPTA1P02549 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6□□□□□ -1.45
SPTA1P02549 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6□□□□□ -1.45
SPTA1P02549 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6□□□□□ -1.45
SPTA1P02549 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6□□□□□ -1.45
SPTA1P02549 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6□□□□□ -1.45
SPTA1P02549 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
SPTA1P02549 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6□□□□□ -1.45
SPTA1P02549 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SPTA1P02549 SMG1P5-202ENST00000529428 4219 ntBASIC6□□□□□ -1.45
SPTA1P02549 SMG1P2-201ENST00000566127 4221 ntBASIC6□□□□□ -1.45
SPTA1P02549 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6□□□□□ -1.45
SPTA1P02549 AC124045.1-201ENST00000606008 1953 ntBASIC6□□□□□ -1.45
SPTA1P02549 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6□□□□□ -1.45
SPTA1P02549 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SPTA1P02549 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6□□□□□ -1.45
SPTA1P02549 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6□□□□□ -1.45
SPTA1P02549 SULT1D1P-201ENST00000458020 882 ntBASIC6□□□□□ -1.45
SPTA1P02549 RPSAP39-201ENST00000467439 883 ntBASIC6□□□□□ -1.45
SPTA1P02549 GLRXP3-201ENST00000470810 321 ntBASIC6□□□□□ -1.45
SPTA1P02549 PFN1P6-201ENST00000476786 399 ntBASIC6□□□□□ -1.45
SPTA1P02549 RNA5SP418-201ENST00000515951 117 ntBASIC6□□□□□ -1.45
SPTA1P02549 IGLV2-28-201ENST00000520681 304 ntBASIC6□□□□□ -1.45
SPTA1P02549 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6□□□□□ -1.45
SPTA1P02549 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6□□□□□ -1.45
SPTA1P02549 AC006924.1-201ENST00000610750 559 ntBASIC6□□□□□ -1.45
SPTA1P02549 AL137246.2-201ENST00000613439 662 ntBASIC6□□□□□ -1.45
SPTA1P02549 MIR7155-201ENST00000615925 56 ntBASIC6□□□□□ -1.45
SPTA1P02549 SNX18P10-201ENST00000625014 519 ntBASIC6□□□□□ -1.45
SPTA1P02549 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 AC091305.2-201ENST00000624049 1576 ntBASIC6□□□□□ -1.45
SPTA1P02549 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 SPATA31B1P-201ENST00000434692 4016 ntBASIC6□□□□□ -1.45
SPTA1P02549 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6□□□□□ -1.45
SPTA1P02549 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms