Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 RPL7-203ENST00000396466 762 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 CYCSP17-201ENST00000407870 315 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC016027.5-201ENST00000427227 210 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC083855.1-201ENST00000440041 258 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 TECRP2-201ENST00000503270 928 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC091965.3-201ENST00000506236 208 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GLYATL1P4-201ENST00000529326 906 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 COX6CP11-201ENST00000555293 229 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 NQO1-205ENST00000561500 891 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 MIR4258-201ENST00000580920 91 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GLYATL1P2-202ENST00000588046 902 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC011921.2-201ENST00000589465 152 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AL157899.1-201ENST00000604110 936 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC004908.1-201ENST00000606572 541 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC027271.1-201ENST00000610270 610 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 MIR6807-201ENST00000621968 92 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 USP46-202ENST00000451218 4622 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC092451.3-201ENST00000625067 1343 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 USP9YP3-201ENST00000434481 1766 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DQA1P01909 RACGAP1P-201ENST00000550663 1879 ntBASIC4.88□□□□□ -1.63
HLA-DQA1P01909 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AL121977.1-201ENST00000401636 979 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC009237.9-201ENST00000414800 347 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 TAS2R2P-201ENST00000421146 910 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC007562.1-201ENST00000421819 517 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 VTI1BP4-201ENST00000427516 527 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 RPS21P1-201ENST00000434479 247 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 PHBP4-201ENST00000437447 837 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC009237.4-201ENST00000441078 238 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC023274.2-201ENST00000445264 521 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC004692.1-201ENST00000455430 424 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 RN7SL791P-201ENST00000467868 295 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AP000805.1-201ENST00000471604 784 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 RN7SL688P-201ENST00000471754 275 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC017007.3-201ENST00000479865 435 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 DCAF13P2-201ENST00000514188 555 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC008429.4-201ENST00000521201 182 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC136777.2-201ENST00000522979 358 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 REG4-204ENST00000530654 612 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQA1P01909 AC018523.1-201ENST00000534211 512 ntBASIC4.87□□□□□ -1.63
HLA-DQA1P01909 ATP5J2P4-201ENST00000538774 267 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms