Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC239809.2-201ENST00000415381 517 ntBASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 MME-217ENST00000616757 1315 ntTSL 5 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC073130.3-201ENST00000624389 2278 ntBASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 KRT16P6-202ENST00000425692 1426 ntBASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PHGDH-210ENST00000641115 1638 ntBASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFRSF11AQ9Y6Q6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AL121906.2-201ENST00000621597 723 ntBASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 FAM197Y4-202ENST00000622692 608 ntBASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.35■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC110285.5-201ENST00000611501 352 ntBASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.34■■□□□ 1.49
TNFRSF11AQ9Y6Q6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AL596275.1-201ENST00000423464 877 ntBASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 UBE2SP1-201ENST00000450587 669 ntBASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC008550.1-201ENST00000511500 884 ntBASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.33■■□□□ 1.49
TNFRSF11AQ9Y6Q6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms