Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 FAM210CP-201ENST00000445714 574 ntBASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 AC124283.5-201ENST00000624661 1809 ntBASIC20.09■□□□□ 0.81
RAI2Q9Y5P3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.08■□□□□ 0.81
RAI2Q9Y5P3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAI2Q9Y5P3 AL691432.2-201ENST00000607222 2038 ntBASIC20.08■□□□□ 0.8
RAI2Q9Y5P3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAI2Q9Y5P3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAI2Q9Y5P3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAI2Q9Y5P3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.08■□□□□ 0.8
RAI2Q9Y5P3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.08■□□□□ 0.8
RAI2Q9Y5P3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI2Q9Y5P3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 POM121L13P-201ENST00000422362 380 ntBASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 TCF3P1-201ENST00000423021 1937 ntBASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAI2Q9Y5P3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms