Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 C2orf69P4-201ENST00000565394 541 ntBASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 FAM197Y4-202ENST00000622692 608 ntBASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB3Q9Y5E6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB3Q9Y5E6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHB3Q9Y5E6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 AC008403.3-201ENST00000598924 454 ntBASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 TCF3P1-201ENST00000423021 1937 ntBASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB3Q9Y5E6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 MIR718-201ENST00000390190 70 ntBASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 AC092720.2-201ENST00000602388 1665 ntBASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 AL356652.1-201ENST00000615962 565 ntBASIC19.38■□□□□ 0.69
PCDHB3Q9Y5E6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB3Q9Y5E6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 SMG8-203ENST00000578922 2178 ntBASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 AL596275.1-201ENST00000423464 877 ntBASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms