Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LINC00167-201ENST00000530583 1419 ntBASIC8.24□□□□□ -1.09
MACF1Q9UPN3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
MACF1Q9UPN3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 GXYLT1P6-201ENST00000456472 1187 ntBASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 LINC01711-201ENST00000598340 967 ntBASIC8.23□□□□□ -1.09
MACF1Q9UPN3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 AC007322.3-201ENST00000426526 701 ntBASIC8.23□□□□□ -1.09
MACF1Q9UPN3 LINC00265-3P-201ENST00000447588 903 ntBASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 REXO1L6P-202ENST00000619970 1078 ntBASIC8.23□□□□□ -1.09
MACF1Q9UPN3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MACF1Q9UPN3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 MFAP1P1-201ENST00000442257 1255 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 YBX1P10-201ENST00000444752 975 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AP000867.3-201ENST00000524675 377 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC148477.8-201ENST00000624298 468 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 STARP1-201ENST00000397973 869 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AF228730.6-201ENST00000641497 218 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC084121.3-201ENST00000641716 218 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC105233.6-201ENST00000642093 218 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC005034.1-201ENST00000426657 489 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AP000692.2-201ENST00000608391 879 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 MIR6799-201ENST00000620297 69 ntBASIC8.22□□□□□ -1.09
MACF1Q9UPN3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms