Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLCF1Q9UBD9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCF1Q9UBD9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 SMG8-203ENST00000578922 2178 ntBASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 AC004264.1-201ENST00000608354 794 ntBASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCF1Q9UBD9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 HTR7P1-201ENST00000538670 1336 ntBASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLCF1Q9UBD9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 AL137060.1-201ENST00000618151 2648 ntBASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 TSPY7P-201ENST00000431358 1114 ntBASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCF1Q9UBD9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
CLCF1Q9UBD9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLCF1Q9UBD9 AC020907.5-201ENST00000624372 1936 ntBASIC17.64■□□□□ 0.42
CLCF1Q9UBD9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CLCF1Q9UBD9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 AL353807.1-201ENST00000427475 662 ntBASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 AF186192.3-201ENST00000583427 947 ntBASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCF1Q9UBD9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 TFP1-202ENST00000475455 1573 ntBASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLCF1Q9UBD9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms