Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 UNC93B2-201ENST00000285383 730 ntBASIC23.52■■□□□ 1.36
DDX4Q9NQI0 MESTP1-201ENST00000404287 994 ntBASIC23.52■■□□□ 1.36
DDX4Q9NQI0 MIR1238-201ENST00000408483 83 ntBASIC23.52■■□□□ 1.36
DDX4Q9NQI0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.52■■□□□ 1.36
DDX4Q9NQI0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 CYP2D8P-201ENST00000433633 1490 ntBASIC23.51■■□□□ 1.35
DDX4Q9NQI0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.51■■□□□ 1.35
DDX4Q9NQI0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 KRT18P16-201ENST00000510337 1294 ntBASIC23.5■■□□□ 1.35
DDX4Q9NQI0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.5■■□□□ 1.35
DDX4Q9NQI0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 PHGDH-210ENST00000641115 1638 ntBASIC23.49■■□□□ 1.35
DDX4Q9NQI0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 AC145285.6-201ENST00000604632 637 ntBASIC23.49■■□□□ 1.35
DDX4Q9NQI0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.49■■□□□ 1.35
DDX4Q9NQI0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 YBX1P10-201ENST00000444752 975 ntBASIC23.48■■□□□ 1.35
DDX4Q9NQI0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 RN7SL850P-201ENST00000579959 291 ntBASIC23.48■■□□□ 1.35
DDX4Q9NQI0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX4Q9NQI0 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.48■■□□□ 1.35
DDX4Q9NQI0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.47■■□□□ 1.35
DDX4Q9NQI0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 FITM1-202ENST00000559294 800 ntBASIC23.47■■□□□ 1.35
DDX4Q9NQI0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 AL445675.2-201ENST00000620291 557 ntBASIC23.47■■□□□ 1.35
DDX4Q9NQI0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX4Q9NQI0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms