Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 AC105020.6-201ENST00000621523 1217 ntBASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC52A3Q9NQ40 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 AL138781.2-201ENST00000617896 1843 ntBASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC52A3Q9NQ40 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 PHGDH-210ENST00000641115 1638 ntBASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 CNN2P6-201ENST00000439038 900 ntBASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 NEFHP1-201ENST00000412845 2629 ntBASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 CROCCP3-202ENST00000420820 1947 ntBASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC52A3Q9NQ40 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 AC068338.2-201ENST00000563278 1430 ntBASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 NTF6G-201ENST00000591094 616 ntBASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC52A3Q9NQ40 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC52A3Q9NQ40 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
SLC52A3Q9NQ40 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.77■□□□□ 0.59
SLC52A3Q9NQ40 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC52A3Q9NQ40 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms