Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 KRT17P1-201ENST00000399211 1546 ntBASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NEUROD4Q9HD90 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 LSM12P1-201ENST00000411836 588 ntBASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEUROD4Q9HD90 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 NCF1B-203ENST00000435988 1254 ntBASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEUROD4Q9HD90 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 GPX1P1-201ENST00000388829 606 ntBASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 CROCCP5-201ENST00000436658 830 ntBASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 MKRN4P-201ENST00000444706 1521 ntBASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEUROD4Q9HD90 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 AL158211.5-201ENST00000623583 2518 ntBASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 AF201337.1-201ENST00000520239 748 ntBASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.68■□□□□ 0.58
NEUROD4Q9HD90 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 PHGDH-210ENST00000641115 1638 ntBASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.67■□□□□ 0.58
NEUROD4Q9HD90 MIR663A-201ENST00000385250 93 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms