Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 CD177P1-201ENST00000606252 935 ntBASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 AC012306.2-201ENST00000609350 630 ntBASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 AL121906.2-201ENST00000621597 723 ntBASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF3Q9HD45 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 AL353807.1-201ENST00000427475 662 ntBASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF3Q9HD45 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 AL353708.3-201ENST00000610272 989 ntBASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TM9SF3Q9HD45 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 FAM197Y1-201ENST00000421178 764 ntBASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF3Q9HD45 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 AC121338.2-201ENST00000622535 1744 ntBASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF3Q9HD45 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TM9SF3Q9HD45 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM9SF3Q9HD45 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM9SF3Q9HD45 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms