Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 AL450487.1-201ENST00000426799 995 ntBASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 SLC25A1P2-201ENST00000430693 912 ntBASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 MFAP1P1-201ENST00000442257 1255 ntBASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 KRT18P16-201ENST00000510337 1294 ntBASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
ZFYVE28Q9HCC9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
ZFYVE28Q9HCC9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 RCC2P6-201ENST00000526625 1557 ntBASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 DUSP5P1-201ENST00000441325 1139 ntBASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 AC093458.2-201ENST00000623150 629 ntBASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 AC141257.4-201ENST00000634557 245 ntBASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 AC136944.6-201ENST00000634818 245 ntBASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.76■■□□□ 1.23
ZFYVE28Q9HCC9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 AC011558.1-201ENST00000623459 338 ntBASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
ZFYVE28Q9HCC9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 AC004951.3-201ENST00000418645 1148 ntBASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 AC007663.1-201ENST00000438948 1240 ntBASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 AL031432.5-201ENST00000641059 760 ntBASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 AC096733.2-201ENST00000609937 1394 ntBASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.74■■□□□ 1.23
ZFYVE28Q9HCC9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ZFYVE28Q9HCC9 AC116351.2-201ENST00000606540 1585 ntBASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms