Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 AP000974.1-201ENST00000623909 2387 ntBASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 AL031963.3-201ENST00000606441 850 ntBASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2J3Q9H1A7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 AC016769.1-201ENST00000409132 1010 ntBASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 KRT8P20-201ENST00000423953 1409 ntBASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2J3Q9H1A7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 AC120498.9-201ENST00000339021 3867 ntBASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 AC093484.2-201ENST00000580996 2166 ntBASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 AC068338.2-201ENST00000563278 1430 ntBASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 TREX1-205ENST00000625293 1783 ntBASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
POLR2J3Q9H1A7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 KRT18P68-201ENST00000392293 1000 ntBASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 KRT18P5-201ENST00000436075 1291 ntBASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 CNN2P6-201ENST00000439038 900 ntBASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 DUX4L16-201ENST00000555130 1264 ntBASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 AC069236.1-201ENST00000604339 616 ntBASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 AC087623.3-201ENST00000607047 1098 ntBASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms