Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 AL121829.2-201ENST00000620908 328 ntBASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 AL157384.1-201ENST00000445995 2473 ntBASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSBP3Q9BWW4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 AC124283.5-201ENST00000624661 1809 ntBASIC16.54■□□□□ 0.24
SSBP3Q9BWW4 KRT16P6-202ENST00000425692 1426 ntBASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 KRASP1-201ENST00000407852 552 ntBASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 AC124016.1-201ENST00000609552 612 ntBASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSBP3Q9BWW4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 AC133681.1-201ENST00000465482 601 ntBASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 AC110285.5-201ENST00000611501 352 ntBASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSBP3Q9BWW4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSBP3Q9BWW4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SSBP3Q9BWW4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SSBP3Q9BWW4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
SSBP3Q9BWW4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SSBP3Q9BWW4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 MIR718-201ENST00000390190 70 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms