Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.08■□□□□ 0.48
NPAS1Q99742 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.08■□□□□ 0.48
NPAS1Q99742 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.08■□□□□ 0.48
NPAS1Q99742 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NPAS1Q99742 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NPAS1Q99742 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.08■□□□□ 0.48
NPAS1Q99742 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS1Q99742 TCF3P1-201ENST00000423021 1937 ntBASIC18.08■□□□□ 0.48
NPAS1Q99742 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
NPAS1Q99742 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
NPAS1Q99742 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS1Q99742 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NPAS1Q99742 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS1Q99742 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NPAS1Q99742 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NPAS1Q99742 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS1Q99742 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS1Q99742 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS1Q99742 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
NPAS1Q99742 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.06■□□□□ 0.48
NPAS1Q99742 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 ESRRAP1-201ENST00000400596 1257 ntBASIC18.06■□□□□ 0.48
NPAS1Q99742 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
NPAS1Q99742 AP003097.1-201ENST00000530657 1135 ntBASIC18.06■□□□□ 0.48
NPAS1Q99742 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.06■□□□□ 0.48
NPAS1Q99742 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.06■□□□□ 0.48
NPAS1Q99742 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.06■□□□□ 0.48
NPAS1Q99742 AC233263.1-201ENST00000578059 224 ntBASIC18.06■□□□□ 0.48
NPAS1Q99742 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NPAS1Q99742 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.06■□□□□ 0.48
NPAS1Q99742 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.06■□□□□ 0.48
NPAS1Q99742 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS1Q99742 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS1Q99742 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.05■□□□□ 0.48
NPAS1Q99742 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 HLA-G-202ENST00000376815 851 ntBASIC18.05■□□□□ 0.48
NPAS1Q99742 HLA-G-203ENST00000376818 1127 ntBASIC18.05■□□□□ 0.48
NPAS1Q99742 AL390719.1-204ENST00000412397 1219 ntBASIC18.05■□□□□ 0.48
NPAS1Q99742 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NPAS1Q99742 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS1Q99742 AC008687.6-201ENST00000596318 630 ntBASIC18.05■□□□□ 0.48
NPAS1Q99742 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.05■□□□□ 0.48
NPAS1Q99742 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NPAS1Q99742 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.05■□□□□ 0.48
NPAS1Q99742 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.05■□□□□ 0.48
NPAS1Q99742 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS1Q99742 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NPAS1Q99742 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.04■□□□□ 0.48
NPAS1Q99742 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS1Q99742 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.04■□□□□ 0.48
NPAS1Q99742 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS1Q99742 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.04■□□□□ 0.48
NPAS1Q99742 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS1Q99742 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS1Q99742 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS1Q99742 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.04■□□□□ 0.48
NPAS1Q99742 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS1Q99742 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms